Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq141313 161 2e-37 seq74219 136 7e-30 seq304449 109 1e-21 seq137487 98.7 2e-18 seq23964 95.1 2e-17 seq151049 77.0 6e-12 >seq141313 Length=366 Score = 161 bits (178), Expect = 2e-37 Identities = 178/233 (76%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131 |||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | Sbjct 132 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAG 191 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTTCT---AGGACCGCCGTAAT 187 ||||||| ||||||||| | |||||||||||||| || ||||| |||| | | || Sbjct 192 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTTCTCAATGGACTGGGGCCAT 250 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||| ||||| | |||||| | ||||| | |||||||||||||||||| Sbjct 251 GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACC 310 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||| || | |||||||| || ||||| | |||||||||||||| Sbjct 311 GGCGCAAGACGGACGAAAGCGAAAGCATTTGCCAAGAANGTTTTCATTAATCA 363 >seq74219 Length=855 Score = 136 bits (150), Expect = 7e-30 Identities = 182/246 (74%), Gaps = 9/246 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATT-AGAGTGTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCAT 130 ||||||||||||||| | || |||||||||||||||| |||| ||||||| ||| Sbjct 597 TTTACTTTGAAAAAAATGAGTGTGTTCAAAGCAGGCCCACTTGCACGAATACTGCAGCTA 656 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT-CTA---GGACCGCCGTAA 186 |||||||| ||||||||| | ||||| ||| | || ||||| || |||| | | | Sbjct 657 GGAATAATGGAATAGGAC-TCCGGTTGTATCTCGTGGGTTTTCTCACTGGACTGGGGCCA 715 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||| ||||| | ||| || ||||| | |||||||||||||||||| Sbjct 716 TGATTAAGAGGGACTGCCGGTGGCACTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGAC 775 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||| || | |||||||| || ||||| |||||||||||||||| |||| Sbjct 776 CGGCGCAAGACGGACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAAC 834 Query 307 GAAAGT 312 |||||| Sbjct 835 GAAAGT 840 >seq304449 Length=257 Score = 109 bits (120), Expect = 1e-21 Identities = 87/101 (86%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAA-TTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCAT 130 ||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||| Sbjct 106 TTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTA 47 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT 171 |||||||| ||||||||| | |||||||||||||| ||||| Sbjct 46 GGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTT 7 >seq137487 Length=143 Score = 98.7 bits (108), Expect = 2e-18 Identities = 83/100 (83%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131 |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||| | Sbjct 105 TTTACTTTGAAAAAATGAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAG 46 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT 171 ||||||| ||||||||| | ||||| ||| | || ||||| Sbjct 45 GAATAATGGAATAGGAC-TCCGGTTGTATCTCGTGGGTTT 7 >seq23964 Length=190 Score = 95.1 bits (104), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 8/156 (5%) Strand=Plus/Minus Query 96 GTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCG 153 |||||||||||||| |||| ||||||| ||| |||||||| ||||||||| | || Sbjct 190 GTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAGGAATAATGGAATAGGAC-TCCG 132 Query 154 GTTCTATTTTGTTGGTT---TCTA-GGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209 |||||||||||| |||| || | |||| | | |||||||| ||||| | ||||| Sbjct 131 GTTCTATTTTGTGGGTTCTCTCAATGGACTGGGGCCATGATTAAGAGGGACGGCCGGGGC 72 Query 210 TGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 || ||||| | |||||||||||||||||| Sbjct 71 ATTC-GTATTGCGCCGCTAGAGGTGAAATTCTTGGA 37 >seq151049 Length=147 Score = 77.0 bits (84), Expect = 6e-12 Identities = 62/73 (85%), Gaps = 3/73 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131 ||||||||||||| |||||||||||||||||||||| |||| ||||||| ||| | Sbjct 76 TTTACTTTGAAAA-ATTAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAG 134 Query 132 GAATAATAGAATA 144 ||||||| ||||| Sbjct 135 GAATAATGGAATA 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911288188096