Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26]
427,427 sequences; 824,311,139 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq141313 161 2e-37
seq74219 136 7e-30
seq304449 109 1e-21
seq137487 98.7 2e-18
seq23964 95.1 2e-17
seq151049 77.0 6e-12
>seq141313
Length=366
Score = 161 bits (178), Expect = 2e-37
Identities = 178/233 (76%), Gaps = 7/233 (3%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131
|||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |
Sbjct 132 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAG 191
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTTCT---AGGACCGCCGTAAT 187
||||||| ||||||||| | |||||||||||||| || ||||| |||| | | ||
Sbjct 192 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTTCTCAATGGACTGGGGCCAT 250
Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247
|||||| ||||| | |||||| | ||||| | ||||||||||||||||||
Sbjct 251 GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACC 310
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||| || | |||||||| || ||||| | ||||||||||||||
Sbjct 311 GGCGCAAGACGGACGAAAGCGAAAGCATTTGCCAAGAANGTTTTCATTAATCA 363
>seq74219
Length=855
Score = 136 bits (150), Expect = 7e-30
Identities = 182/246 (74%), Gaps = 9/246 (4%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATT-AGAGTGTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCAT 130
||||||||||||||| | || |||||||||||||||| |||| ||||||| |||
Sbjct 597 TTTACTTTGAAAAAAATGAGTGTGTTCAAAGCAGGCCCACTTGCACGAATACTGCAGCTA 656
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT-CTA---GGACCGCCGTAA 186
|||||||| ||||||||| | ||||| ||| | || ||||| || |||| | | |
Sbjct 657 GGAATAATGGAATAGGAC-TCCGGTTGTATCTCGTGGGTTTTCTCACTGGACTGGGGCCA 715
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||| ||||| | ||| || ||||| | ||||||||||||||||||
Sbjct 716 TGATTAAGAGGGACTGCCGGTGGCACTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGAC 775
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||| || | |||||||| || ||||| |||||||||||||||| ||||
Sbjct 776 CGGCGCAAGACGGACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAAC 834
Query 307 GAAAGT 312
||||||
Sbjct 835 GAAAGT 840
>seq304449
Length=257
Score = 109 bits (120), Expect = 1e-21
Identities = 87/101 (86%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAA-TTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCAT 130
||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||
Sbjct 106 TTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTA 47
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT 171
|||||||| ||||||||| | |||||||||||||| |||||
Sbjct 46 GGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTT 7
>seq137487
Length=143
Score = 98.7 bits (108), Expect = 2e-18
Identities = 83/100 (83%), Gaps = 3/100 (3%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131
|||||||||||||||| ||||||||||||||||||| |||| ||||||| ||| |
Sbjct 105 TTTACTTTGAAAAAATGAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAG 46
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT 171
||||||| ||||||||| | ||||| ||| | || |||||
Sbjct 45 GAATAATGGAATAGGAC-TCCGGTTGTATCTCGTGGGTTT 7
>seq23964
Length=190
Score = 95.1 bits (104), Expect = 2e-17
Identities = 118/156 (76%), Gaps = 8/156 (5%)
Strand=Plus/Minus
Query 96 GTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCG 153
|||||||||||||| |||| ||||||| ||| |||||||| ||||||||| | ||
Sbjct 190 GTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAGGAATAATGGAATAGGAC-TCCG 132
Query 154 GTTCTATTTTGTTGGTT---TCTA-GGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209
|||||||||||| |||| || | |||| | | |||||||| ||||| | |||||
Sbjct 131 GTTCTATTTTGTGGGTTCTCTCAATGGACTGGGGCCATGATTAAGAGGGACGGCCGGGGC 72
Query 210 TGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|| ||||| | ||||||||||||||||||
Sbjct 71 ATTC-GTATTGCGCCGCTAGAGGTGAAATTCTTGGA 37
>seq151049
Length=147
Score = 77.0 bits (84), Expect = 6e-12
Identities = 62/73 (85%), Gaps = 3/73 (4%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131
||||||||||||| |||||||||||||||||||||| |||| ||||||| ||| |
Sbjct 76 TTTACTTTGAAAA-ATTAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAG 134
Query 132 GAATAATAGAATA 144
||||||| |||||
Sbjct 135 GAATAATGGAATA 147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 911288188096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |