Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26]
427,427 sequences; 824,311,139 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq144963 141 4e-31
seq327091 131 7e-28
seq85397 104 1e-19
seq130880 98.7 4e-18
seq321252 89.7 2e-15
seq26574 89.7 2e-15
seq146746 87.8 7e-15
seq332899 86.0 3e-14
seq2750 82.4 3e-13
seq88666 80.6 1e-12
seq104644 75.2 5e-11
>seq144963
Length=444
Score = 141 bits (156), Expect = 4e-31
Identities = 99/113 (88%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 146 ACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGG 205
Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| || |||||| ||| ||||||||||| ||||| | |||| ||||||||||
Sbjct 206 CCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGCATAGGGGCGA 258
>seq327091
Length=959
Score = 131 bits (144), Expect = 7e-28
Identities = 125/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || |||| |||||| | | ||||| |||||||
Sbjct 955 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 896
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| |||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 895 ACTGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 836
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 835 AGAGAGTTCAACAGGGCGTGAAACCGTTAAGAGGTAAACG 796
>seq85397
Length=190
Score = 104 bits (114), Expect = 1e-19
Identities = 78/92 (85%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 592 GCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGC 651
||||| |||| ||||||||||||||||||||||||||| || |||||| ||| |||||
Sbjct 1 GCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGTAGCGGTCCTGACGTGC 60
Query 652 AAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| ||||| | |||| ||||||||||
Sbjct 61 AAATCGGTCGTCCGACCTGGGCATAGGGGCGA 92
>seq130880
Length=435
Score = 98.7 bits (108), Expect = 4e-18
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 68 AAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGT 127
|| |||| |||||| | | ||||| |||||||| |||| ||||||||||| ||||||
Sbjct 431 AAGTGGGTGGTAAACTCCATCTAAGGCTAAATACTGGCACGAGACCGATAGTCGACAAGT 372
Query 128 AGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTT 187
| || | ||||| ||||||| |||||| | |||||||| || || ||||||| |||
Sbjct 371 ACCGTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAACAGGGCGTGAAACCGTT 312
Query 188 GAAAGGGAAGCG 199
| ||| || ||
Sbjct 311 AAGAGGTAAACG 300
>seq321252
Length=1768
Score = 89.7 bits (98), Expect = 2e-15
Identities = 58/64 (91%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630
|||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||
Sbjct 1126 ACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCAAGAGGAAACTCTGGTGGAGG 1185
Query 631 CTCG 634
| ||
Sbjct 1186 CCCG 1189
>seq26574
Length=291
Score = 89.7 bits (98), Expect = 2e-15
Identities = 95/126 (75%), Gaps = 7/126 (6%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || |||| |||||| | | ||||| ||
Sbjct 81 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGC----- 135
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 136 --TGGCATGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 193
Query 160 AGAGAG 165
||||||
Sbjct 194 AGAGAG 199
>seq146746
Length=220
Score = 87.8 bits (96), Expect = 7e-15
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
||||| |||||||| |||| ||||||||||| ||||||| || | ||||| ||||
Sbjct 4 TCTAAGGCTAAATACTGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAA 63
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||| |||||| | |||||||| || || ||||||| ||| | ||| || ||
Sbjct 64 AAGAACTTTGAAGAGAGAGTTCAACAGGGCGTGAAACCGTTAAGAGGTAAACG 116
>seq332899
Length=406
Score = 86.0 bits (94), Expect = 3e-14
Identities = 90/117 (77%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
||||| |||||||| |||| ||||||||||| ||||||| || | ||||| ||||
Sbjct 214 TCTAAGGCTAAATACTGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAA 155
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203
||| |||||| | |||||||| || || ||||||| ||| || ||||| | |||
Sbjct 154 AAGAACTTTGAAGAGAGAGTTCAACAGGGCGTGAAACCGTT-AAGAGGAAGGGTTTG 99
>seq2750
Length=414638
Score = 82.4 bits (90), Expect = 3e-13
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 591 TGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTG 650
|||||| |||| |||||||||||||||| || |||||| || |||||| | | ||||
Sbjct 265099 TGCCTGGGCAGGGCGAAGCCAGAGGAAACTTTGTCGGAGGCCCGTAGCGGTCCCGACGTG 265040
Query 651 CAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| ||||| | |||| || |||||||
Sbjct 265039 CAAATCGGTCGTCCGACCTGGGCATGGGGGCGA 265007
>seq88666
Length=632
Score = 80.6 bits (88), Expect = 1e-12
Identities = 82/107 (77%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||||||||||||| ||| ||||||||||| ||||||| || | ||||| ||||
Sbjct 115 TCTAAAGCTAAATACCGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAA 56
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193
||| |||||| | || ||||| || || ||||||| ||| | |||
Sbjct 55 AAGAACTTTGAAGAGGGAGTTCAACAGGGCGTGAAACCGTTAAGAGG 9
>seq104644
Length=176
Score = 75.2 bits (82), Expect = 5e-11
Identities = 72/90 (80%), Gaps = 2/90 (2%)
Strand=Plus/Plus
Query 40 GAGTCGAGTT-GTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98
|||||| ||| | ||||||||||||| | || ||| |||||| | | ||||| ||||||
Sbjct 88 GAGTCGGGTTTGCTTGGGAATGCAGCCCAAAGTGGT-GGTAAACTCCATCTAAGGCTAAA 146
Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTA 128
|| |||| ||||||||||| |||||||
Sbjct 147 TACTGGCACGAGACCGATAGTCGACAAGTA 176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2070831690850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |