Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq144963 141 4e-31 seq327091 131 7e-28 seq85397 104 1e-19 seq130880 98.7 4e-18 seq321252 89.7 2e-15 seq26574 89.7 2e-15 seq146746 87.8 7e-15 seq332899 86.0 3e-14 seq2750 82.4 3e-13 seq88666 80.6 1e-12 seq104644 75.2 5e-11 >seq144963 Length=444 Score = 141 bits (156), Expect = 4e-31 Identities = 99/113 (88%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct 146 ACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGG 205 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | || |||||| ||| ||||||||||| ||||| | |||| |||||||||| Sbjct 206 CCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGCATAGGGGCGA 258 >seq327091 Length=959 Score = 131 bits (144), Expect = 7e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || |||| |||||| | | ||||| ||||||| Sbjct 955 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 896 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 895 ACTGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 836 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 835 AGAGAGTTCAACAGGGCGTGAAACCGTTAAGAGGTAAACG 796 >seq85397 Length=190 Score = 104 bits (114), Expect = 1e-19 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 592 GCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGC 651 ||||| |||| ||||||||||||||||||||||||||| || |||||| ||| ||||| Sbjct 1 GCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGTAGCGGTCCTGACGTGC 60 Query 652 AAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||||| | |||| |||||||||| Sbjct 61 AAATCGGTCGTCCGACCTGGGCATAGGGGCGA 92 >seq130880 Length=435 Score = 98.7 bits (108), Expect = 4e-18 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 68 AAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGT 127 || |||| |||||| | | ||||| |||||||| |||| ||||||||||| |||||| Sbjct 431 AAGTGGGTGGTAAACTCCATCTAAGGCTAAATACTGGCACGAGACCGATAGTCGACAAGT 372 Query 128 AGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTT 187 | || | ||||| ||||||| |||||| | |||||||| || || ||||||| ||| Sbjct 371 ACCGTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAACAGGGCGTGAAACCGTT 312 Query 188 GAAAGGGAAGCG 199 | ||| || || Sbjct 311 AAGAGGTAAACG 300 >seq321252 Length=1768 Score = 89.7 bits (98), Expect = 2e-15 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| Sbjct 1126 ACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCAAGAGGAAACTCTGGTGGAGG 1185 Query 631 CTCG 634 | || Sbjct 1186 CCCG 1189 >seq26574 Length=291 Score = 89.7 bits (98), Expect = 2e-15 Identities = 95/126 (75%), Gaps = 7/126 (6%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || |||| |||||| | | ||||| || Sbjct 81 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGC----- 135 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 136 --TGGCATGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 193 Query 160 AGAGAG 165 |||||| Sbjct 194 AGAGAG 199 >seq146746 Length=220 Score = 87.8 bits (96), Expect = 7e-15 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||||| |||||||| |||| ||||||||||| ||||||| || | ||||| |||| Sbjct 4 TCTAAGGCTAAATACTGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAA 63 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||| |||||| | |||||||| || || ||||||| ||| | ||| || || Sbjct 64 AAGAACTTTGAAGAGAGAGTTCAACAGGGCGTGAAACCGTTAAGAGGTAAACG 116 >seq332899 Length=406 Score = 86.0 bits (94), Expect = 3e-14 Identities = 90/117 (77%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||||| |||||||| |||| ||||||||||| ||||||| || | ||||| |||| Sbjct 214 TCTAAGGCTAAATACTGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAA 155 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 ||| |||||| | |||||||| || || ||||||| ||| || ||||| | ||| Sbjct 154 AAGAACTTTGAAGAGAGAGTTCAACAGGGCGTGAAACCGTT-AAGAGGAAGGGTTTG 99 >seq2750 Length=414638 Score = 82.4 bits (90), Expect = 3e-13 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 591 TGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTG 650 |||||| |||| |||||||||||||||| || |||||| || |||||| | | |||| Sbjct 265099 TGCCTGGGCAGGGCGAAGCCAGAGGAAACTTTGTCGGAGGCCCGTAGCGGTCCCGACGTG 265040 Query 651 CAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| ||||| | |||| || ||||||| Sbjct 265039 CAAATCGGTCGTCCGACCTGGGCATGGGGGCGA 265007 >seq88666 Length=632 Score = 80.6 bits (88), Expect = 1e-12 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||| ||| ||||||||||| ||||||| || | ||||| |||| Sbjct 115 TCTAAAGCTAAATACCGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAA 56 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 ||| |||||| | || ||||| || || ||||||| ||| | ||| Sbjct 55 AAGAACTTTGAAGAGGGAGTTCAACAGGGCGTGAAACCGTTAAGAGG 9 >seq104644 Length=176 Score = 75.2 bits (82), Expect = 5e-11 Identities = 72/90 (80%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTT-GTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 |||||| ||| | ||||||||||||| | || ||| |||||| | | ||||| |||||| Sbjct 88 GAGTCGGGTTTGCTTGGGAATGCAGCCCAAAGTGGT-GGTAAACTCCATCTAAGGCTAAA 146 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTA 128 || |||| ||||||||||| ||||||| Sbjct 147 TACTGGCACGAGACCGATAGTCGACAAGTA 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2070831690850