Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26]
427,427 sequences; 824,311,139 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq363986 187 4e-45
seq125073 158 2e-36
seq376017 154 2e-35
seq222375 145 1e-32
seq137693 134 2e-29
seq125516 111 2e-22
seq98693 111 2e-22
seq1965 107 3e-21
seq137541 89.7 8e-16
>seq363986
Length=457
Score = 187 bits (206), Expect = 4e-45
Identities = 178/222 (80%), Gaps = 8/222 (4%)
Strand=Plus/Plus
Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70
|||| ||||||| |||||||||| |||| | |||||||||||||||||||||||||||||
Sbjct 238 TCCGCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 297
Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--GCCACCAACC 128
|| |||| || | |||||| | |||| | |||||||||||||| | | || |||
Sbjct 298 GC-TCAATCT-CGTGTGGCTGTACGCCACTTGTCCCTCTAAGAAGTTTTGGACGCCGACC 355
Query 129 ATAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAG 185
| | | | ||||||||| | | |||||||||||| ||||||||||||||
Sbjct 356 GCACGGGGCCGCGTAACTATTTAGCCTGCCAGAGTCTCGTTCGTTGTCGGAATTAACCAG 415
Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227
||||||| |||||||||||| |||||||||||||||||||||
Sbjct 416 ACAAATCGCTCCACCAACTACGAACGGCCATGCACCACCACC 457
>seq125073
Length=231
Score = 158 bits (174), Expect = 2e-36
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||||||||| | | |||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 19 CTATTTAGCCTGCCAGAGTCTCGTTCGTTGTCGGAATTAACCAGACAAATCGCTCCACCA 78
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct 79 ACTACGAACGGCCATGCACCACCACCCACAGTATCGAGAAAGAGCTATCAATCTGTC 135
>seq376017
Length=457
Score = 154 bits (170), Expect = 2e-35
Identities = 94/100 (94%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 9 GTCTCGTTCGTTGTCGGAATTAACCAGACAAATCGCTCCACCAACTACGAACGGCCATGC 68
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| || ||| |||||||||||||||||||||
Sbjct 69 ACCACCACCCACAGTATCGAGAAAGAGCTATCAATCTGTC 108
>seq222375
Length=850
Score = 145 bits (160), Expect = 1e-32
Identities = 92/100 (92%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 161 GTCTCGTTCGTTGTCGGAATTAACCAGACAAATCGCTCCACCAACTACGAACGGCCATGA 102
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||| ||| || ||| |||||||||||||||||||||
Sbjct 101 ACCACCAGCCACAGTATCGAGAAAGAGCTATCAATCTGTC 62
>seq137693
Length=154
Score = 134 bits (148), Expect = 2e-29
Identities = 94/103 (91%), Gaps = 3/103 (3%)
Strand=Plus/Plus
Query 159 GTCT-CGTTCGTTA-TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216
|||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 44 GTCTACGTTCGTTTGTCGGAATTAACCAGACAAATCGCTCCACCAACTACGAACGGCCAT 103
Query 217 GCACCACCACCCATAGAATCAAGAAAG-AGCTATCAATCTGTC 258
||||||||||||| || ||| |||||| |||||||||||||||
Sbjct 104 GCACCACCACCCACAGTATCGAGAAAGAAGCTATCAATCTGTC 146
>seq125516
Length=294
Score = 111 bits (122), Expect = 2e-22
Identities = 90/105 (86%), Gaps = 3/105 (3%)
Strand=Plus/Plus
Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70
|||| ||||||| |||||||||| |||| | |||||||||||||||||||||||||||||
Sbjct 153 TCCGCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 212
Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
| ||||| | || |||||| | |||| | ||||||||||||||
Sbjct 213 G-CTCAATC-TCGTGTGGCTGTACGCCACTTGTCCCTCTAAGAAG 255
>seq98693
Length=350
Score = 111 bits (122), Expect = 2e-22
Identities = 90/105 (86%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70
|||| ||||||| |||||||||| |||| | |||||||||||||||||||||||||||||
Sbjct 142 TCCGCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 83
Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
| ||||| | || |||||| | |||| | ||||||||||||||
Sbjct 82 G-CTCAATC-TCGTGTGGCTGTACGCCACTTGTCCCTCTAAGAAG 40
>seq1965
Length=25600
Score = 107 bits (118), Expect = 3e-21
Identities = 111/144 (77%), Gaps = 5/144 (3%)
Strand=Plus/Minus
Query 86 TGGCTGGAAGCCAATAGTCCCTCTAAGAAG--CCAGCCACCAACCATAGTCGATGGGG-- 141
|||||| | |||| | |||||||||||||| | | | || ||| | | | |
Sbjct 1836 TGGCTGTACGCCACTTGTCCCTCTAAGAAGTTCTGGACGCCGACCGCACGGGGCCGCGTA 1777
Query 142 -CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200
||||||||| | | |||||||| ||| ||||||||||||||||||||| |||||||
Sbjct 1776 ACTATTTAGCCTGCCAGAGTCTCGTTTGTTGTCGGAATTAACCAGACAAATCGCTCCACC 1717
Query 201 AACTAAGAACGGCCATGCACCACC 224
||||| ||||||||||||||||||
Sbjct 1716 AACTACGAACGGCCATGCACCACC 1693
>seq137541
Length=188
Score = 89.7 bits (98), Expect = 8e-16
Identities = 75/88 (85%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70
|||| ||||||| |||||||||| |||| | |||||||||||||||||||||||||||||
Sbjct 91 TCCGCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 32
Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCA 98
| ||||| | || |||||| | ||||
Sbjct 31 G-CTCAATC-TCGTGTGGCTGTACGCCA 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 793500690987
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |