Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq363986 187 4e-45 seq125073 158 2e-36 seq376017 154 2e-35 seq222375 145 1e-32 seq137693 134 2e-29 seq125516 111 2e-22 seq98693 111 2e-22 seq1965 107 3e-21 seq137541 89.7 8e-16 >seq363986 Length=457 Score = 187 bits (206), Expect = 4e-45 Identities = 178/222 (80%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70 |||| ||||||| |||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct 238 TCCGCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 297 Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--GCCACCAACC 128 || |||| || | |||||| | |||| | |||||||||||||| | | || ||| Sbjct 298 GC-TCAATCT-CGTGTGGCTGTACGCCACTTGTCCCTCTAAGAAGTTTTGGACGCCGACC 355 Query 129 ATAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAG 185 | | | | ||||||||| | | |||||||||||| |||||||||||||| Sbjct 356 GCACGGGGCCGCGTAACTATTTAGCCTGCCAGAGTCTCGTTCGTTGTCGGAATTAACCAG 415 Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 ||||||| |||||||||||| ||||||||||||||||||||| Sbjct 416 ACAAATCGCTCCACCAACTACGAACGGCCATGCACCACCACC 457 >seq125073 Length=231 Score = 158 bits (174), Expect = 2e-36 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||||| | | |||||||||||| ||||||||||||||||||||| |||||||| Sbjct 19 CTATTTAGCCTGCCAGAGTCTCGTTCGTTGTCGGAATTAACCAGACAAATCGCTCCACCA 78 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||| ||||||||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct 79 ACTACGAACGGCCATGCACCACCACCCACAGTATCGAGAAAGAGCTATCAATCTGTC 135 >seq376017 Length=457 Score = 154 bits (170), Expect = 2e-35 Identities = 94/100 (94%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 9 GTCTCGTTCGTTGTCGGAATTAACCAGACAAATCGCTCCACCAACTACGAACGGCCATGC 68 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| || ||| ||||||||||||||||||||| Sbjct 69 ACCACCACCCACAGTATCGAGAAAGAGCTATCAATCTGTC 108 >seq222375 Length=850 Score = 145 bits (160), Expect = 1e-32 Identities = 92/100 (92%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 161 GTCTCGTTCGTTGTCGGAATTAACCAGACAAATCGCTCCACCAACTACGAACGGCCATGA 102 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| ||| || ||| ||||||||||||||||||||| Sbjct 101 ACCACCAGCCACAGTATCGAGAAAGAGCTATCAATCTGTC 62 >seq137693 Length=154 Score = 134 bits (148), Expect = 2e-29 Identities = 94/103 (91%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 159 GTCT-CGTTCGTTA-TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 |||| |||||||| ||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 44 GTCTACGTTCGTTTGTCGGAATTAACCAGACAAATCGCTCCACCAACTACGAACGGCCAT 103 Query 217 GCACCACCACCCATAGAATCAAGAAAG-AGCTATCAATCTGTC 258 ||||||||||||| || ||| |||||| ||||||||||||||| Sbjct 104 GCACCACCACCCACAGTATCGAGAAAGAAGCTATCAATCTGTC 146 >seq125516 Length=294 Score = 111 bits (122), Expect = 2e-22 Identities = 90/105 (86%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70 |||| ||||||| |||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct 153 TCCGCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 212 Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | ||||| | || |||||| | |||| | |||||||||||||| Sbjct 213 G-CTCAATC-TCGTGTGGCTGTACGCCACTTGTCCCTCTAAGAAG 255 >seq98693 Length=350 Score = 111 bits (122), Expect = 2e-22 Identities = 90/105 (86%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70 |||| ||||||| |||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct 142 TCCGCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 83 Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | ||||| | || |||||| | |||| | |||||||||||||| Sbjct 82 G-CTCAATC-TCGTGTGGCTGTACGCCACTTGTCCCTCTAAGAAG 40 >seq1965 Length=25600 Score = 107 bits (118), Expect = 3e-21 Identities = 111/144 (77%), Gaps = 5/144 (3%) Strand=Plus/Minus Query 86 TGGCTGGAAGCCAATAGTCCCTCTAAGAAG--CCAGCCACCAACCATAGTCGATGGGG-- 141 |||||| | |||| | |||||||||||||| | | | || ||| | | | | Sbjct 1836 TGGCTGTACGCCACTTGTCCCTCTAAGAAGTTCTGGACGCCGACCGCACGGGGCCGCGTA 1777 Query 142 -CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 ||||||||| | | |||||||| ||| ||||||||||||||||||||| ||||||| Sbjct 1776 ACTATTTAGCCTGCCAGAGTCTCGTTTGTTGTCGGAATTAACCAGACAAATCGCTCCACC 1717 Query 201 AACTAAGAACGGCCATGCACCACC 224 ||||| |||||||||||||||||| Sbjct 1716 AACTACGAACGGCCATGCACCACC 1693 >seq137541 Length=188 Score = 89.7 bits (98), Expect = 8e-16 Identities = 75/88 (85%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70 |||| ||||||| |||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct 91 TCCGCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 32 Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCA 98 | ||||| | || |||||| | |||| Sbjct 31 G-CTCAATC-TCGTGTGGCTGTACGCCA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793500690987