Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq385084 86.0 4e-15 seq363986 86.0 4e-15 seq98693 86.0 4e-15 >seq385084 Length=898 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 649 CTCACTAAGCCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 706 Query 109 TAATACAACGCAAGCT 124 |||| |||| | |||| Sbjct 707 TAAT-CAACACGAGCT 721 >seq363986 Length=457 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 86 CTCACTAAGCCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 143 Query 109 TAATACAACGCAAGCT 124 |||| |||| | |||| Sbjct 144 TAAT-CAACACGAGCT 158 >seq98693 Length=350 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 336 CTCACTAAGCCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 279 Query 109 TAATACAACGCAAGCT 124 |||| |||| | |||| Sbjct 278 TAAT-CAACACGAGCT 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299594655860