Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq141313 109 6e-22 seq304449 100 3e-19 seq137487 89.7 5e-16 seq74219 78.8 9e-13 >seq141313 Length=366 Score = 109 bits (120), Expect = 6e-22 Identities = 135/179 (75%), Gaps = 8/179 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 ||||||||||||||||||||| |||||||||||||| |||| ||||||| | | | Sbjct 132 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAG 191 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGG-TTTCT---AGGACCGCCCGTAA 126 ||||||| ||||||||| | |||||||||||||| || ||||| |||| | | | Sbjct 192 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTTCTCAATGGACTG-GGGCCA 249 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 250 TGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 308 >seq304449 Length=257 Score = 100 bits (110), Expect = 3e-19 Identities = 85/101 (84%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAA-TTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCAT 69 ||||||||||||||| |||||| |||||||||||||| |||| ||||||| | | Sbjct 106 TTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTA 47 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||| ||||||||| | |||||||||||||| ||||| Sbjct 46 GGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTT 7 >seq137487 Length=143 Score = 89.7 bits (98), Expect = 5e-16 Identities = 81/100 (81%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||||| |||| ||||||| | | | Sbjct 105 TTTACTTTGAAAAAATGAGAGTGTTCAAAGCAGGCCCAGTTGCACGAATACTGCAGCTAG 46 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||| ||||||||| | ||||| ||| | || ||||| Sbjct 45 GAATAATGGAATAGGAC-TCCGGTTGTATCTCGTGGGTTT 7 >seq74219 Length=855 Score = 78.8 bits (86), Expect = 9e-13 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATT-AGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCAT 69 ||||||||||||||| | || | |||||||||||||| |||| ||||||| | | Sbjct 597 TTTACTTTGAAAAAAATGAGTGTGTTCAAAGCAGGCCCACTTGCACGAATACTGCAGCTA 656 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||| ||||||||| | ||||| ||| | || ||||| Sbjct 657 GGAATAATGGAATAGGAC-TCCGGTTGTATCTCGTGGGTTT 696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509879962080