Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq98693 179 7e-43 seq125516 174 3e-41 seq385084 152 1e-34 seq137541 113 9e-23 seq123873 95.1 2e-17 seq363986 93.3 8e-17 >seq98693 Length=350 Score = 179 bits (198), Expect = 7e-43 Identities = 197/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 40 CTTCTTAGAGGGACAAGTGGCGTACAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 97 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||||||| | || || || | | Sbjct 98 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGCGGATCAGCGTGTGCCTGC 157 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| ||| ||||||| | | || | | ||||| ||||||| | | |||| Sbjct 158 CCTTCGCCGACAGGCGTGGGTAACCCGCTGAACCCCGCTCGTGATGGGGATTGGGGATTG 217 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||| | || | | | |||||||||| || ||||||| || |||| ||| || ||||||| Sbjct 218 CAACTGTTTCCCATGAACGAGGAATTCCCAGTAAGCACGGGTCACAAGCTCGTGTTGATT 277 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 278 AAGTCCCTGCCCTTTGTA 295 >seq125516 Length=294 Score = 174 bits (192), Expect = 3e-41 Identities = 195/257 (76%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 255 CTTCTTAGAGGGACAAGTGGCGTACAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 198 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||||||| | || || || | | Sbjct 197 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGCGGATCAGCGTGTGCCTGC 138 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | |||| ||| ||||||| | | || | | ||||| ||||||| | | |||| Sbjct 137 CCCTCGCCGACAGGCGTGGGTAACCCGCTGAACCCCGCTCGTGATGGGGATTGGGGATTG 78 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||| | || | | | |||||||||| || ||||||| || |||| ||| || ||||||| Sbjct 77 CAACTGTTTCCCATGAACGAGGAATTCCCAGTAAGCACGGGTCACAAGCTCGTGTTGATT 18 Query 311 ACGTCCCTGCCCTTTGT 327 | ||||||||||||||| Sbjct 17 AAGTCCCTGCCCTTTGT 1 >seq385084 Length=898 Score = 152 bits (168), Expect = 1e-34 Identities = 162/210 (77%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 121 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAAC 180 |||||||||||||||||||||||| | |||| |||||||||| ||||||| | || | Sbjct 898 CAGGTCTGTGATGCCCTTAGATGTCC-GGGCTGCACGCGCGCCACACTGAGCGGATCAGC 840 Query 181 GAGTTCATCACCTTG-GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG-TCGTGCTGGG 238 | || | | |||| |||| ||| ||||||| | | | ||| | | ||||| |||| Sbjct 839 GTGTGCCTGCCCTTACGCCGACAGGCGTGGGTAAACCCGCTGAACCCCGCTCGTGATGGG 780 Query 239 GATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAG 298 ||| | | ||||||| | || | | | |||||||||| || ||||||| || |||| || Sbjct 779 GATTGGGGATTGCAACTGTTTCCCATGAACGAGGAATTCCCAGTAAGCACGGGTCACAAG 720 Query 299 CACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || |||||||| |||||||||||||||| Sbjct 719 CTCGTGTTGATTAAGTCCCTGCCCTTTGTA 690 >seq137541 Length=188 Score = 113 bits (124), Expect = 9e-23 Identities = 126/167 (75%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| | |||| |||||||||| || Sbjct 23 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCAC 81 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 ||||| | || || || | | |||| |||| ||| ||||||| | | || | Sbjct 82 ACTGAGCGGATCAGCGTGTGCCTGCCCTTCGCCGACAGGCGTGGGTAACCCGCTGAACCC 141 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGG 272 | ||||| ||||||| | | ||||||| | || | | | ||||||| Sbjct 142 CGCTCGTGATGGGGATTGGGGATTGCAACTGTTTCCCATGAACGAGG 188 >seq123873 Length=234 Score = 95.1 bits (104), Expect = 2e-17 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| ||||||| | | ||||||| | || | | | |||||||||| || ||||||| | Sbjct 123 TCGTGATGGGGATTGGGGATTGCAACTGTTTCCCATGAACGAGGAATTCCCAGTAAGCAC 182 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||| ||| || |||||||| |||||||||||||||| Sbjct 183 GGGTCACAAGCTCGTGTTGATTAAGTCCCTGCCCTTTGTA 222 >seq363986 Length=457 Score = 93.3 bits (102), Expect = 8e-17 Identities = 83/100 (83%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 340 CTTCTTAGAGGGACAAGTGGCGTACAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 283 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||| | |||| |||||||||| ||||||| Sbjct 282 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGA 243 Score = 80.6 bits (88), Expect = 5e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||| | || | | | |||||||||| || ||||||| || |||| ||| || ||| Sbjct 208 ATTGCAACTGTTTCCCATGAACGAGGAATTCCCAGTAAGCACGGGTCACAAGCTCGTGTT 149 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| |||||||||||||||| Sbjct 148 GATTAAGTCCCTGCCCTTTGTA 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943151411456