Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26]
427,427 sequences; 824,311,139 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq367448 316 6e-84
seq341519 289 9e-76
seq387861 269 8e-70
seq356943 244 3e-62
seq156511 215 2e-53
seq380429 194 5e-47
seq68951 145 2e-32
seq167005 111 5e-22
seq34637 102 2e-19
seq54662 98.7 3e-18
seq5545 98.7 3e-18
seq67313 86.0 2e-14
seq4123 77.0 1e-11
seq125680 75.2 3e-11
>seq367448
Length=431
Score = 316 bits (350), Expect = 6e-84
Identities = 329/423 (78%), Gaps = 24/423 (6%)
Strand=Plus/Plus
Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTT 60
Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221
|||||| | |||||||||||| | ||||||||||||||||||||||||| |||
Sbjct 61 ACCCGTGGTCACCATGGTAGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTC 120
Query 222 GAATGAACCATCGCCGGCTCAA-GGCCATGCGATTCGTT--AAGTTATTATGAATCACCA 278
|||||| | || ||| | ||| || | ||||| | | | ||||| || ||||||
Sbjct 121 GAATGAGACGTCACCGCCACAAAGGGCGCGCGATCGGCTCGAGGTTATCTAGAGTCACCA 180
Query 279 AGGAGCCCCG---AA--------GG---GCGTTGGTTTTTTATCTAATAAATACACCCCT 324
| | | || | || || || | |||||| ||| |||||| ||| | |
Sbjct 181 AAGCGGCCGGGGCAACCGAGATTGGCCCGCATGGGTTTTGGGTCTGATAAATGCACGCAT 240
Query 325 TCC--GAAGTCGGGGTTTTTA-GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381
|| || ||| | | | | ||||||||||||||||||||| |||| |||||||| ||
Sbjct 241 CCCCGGAGGTCAGCGCTCGTCTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGT 300
Query 382 A--GTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439
| || || | |||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 301 AACGTT-GGAGCGATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 359
Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499
|| | | | ||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 360 TACCGGCCGTGTGTACTTAGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACT 418
Query 500 GGC 502
|||
Sbjct 419 GGC 421
>seq341519
Length=350
Score = 289 bits (320), Expect = 9e-76
Identities = 218/254 (86%), Gaps = 2/254 (1%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 76 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 135
Query 62 CCCGTGTCGGGAT-TGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 136 CACGTGTCGTGAAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATT 195
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct 196 TCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTA 255
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||| || ||||||||||||||||||||||||| ||| |||||| | |||||| |
Sbjct 256 GGCACATAGAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGTCGTCGCCGCCG 315
Query 241 CAAGGCCATGCGAT 254
| ||| | |||||
Sbjct 316 CGAGGGCGAGCGAT 329
>seq387861
Length=398
Score = 269 bits (298), Expect = 8e-70
Identities = 219/261 (84%), Gaps = 6/261 (2%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACCCAA---AAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||||||| || || | ||||| ||||||| ||||| | |||||||||
Sbjct 388 ACTCATTCCAATTACGAGGGCCTACGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 329
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 328 TCCACGTGTCGTGAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 269
Query 120 TTCTCAGG-CTCCCTCTCCGGAAT-CGAACCCT-AATTCCCCGTTACCCGTTGATACCAT 176
|||||||| ||||||||||||||| |||||||| | ||||||||||||||| | |||||
Sbjct 268 TTCTCAGGCCTCCCTCTCCGGAATCCGAACCCTGACTTCCCCGTTACCCGTGGTCACCAT 209
Query 177 GGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236
||||||| || ||||||||||||||||||||||||| ||| |||||| | |||||
Sbjct 208 GGTAGGCACATAGAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGTCGTCGCC 149
Query 237 GGCTCAAGGCCATGCGATTCG 257
| | | ||| | ||||| ||
Sbjct 148 GCCGCGAGGGCGAGCGATCCG 128
>seq356943
Length=570
Score = 244 bits (270), Expect = 3e-62
Identities = 294/399 (74%), Gaps = 27/399 (7%)
Strand=Plus/Plus
Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCC 191
||||||||||||||||||| |||||||||||||||| | |||||||||||| ||
Sbjct 1 CTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGGCACATAGAG 60
Query 192 TACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGC 251
||||||||||||||||||||||||| ||| |||||| | |||||| | | ||| | ||
Sbjct 61 TACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGTCGTCGCCGCCGCGAGGGCGAGC 120
Query 252 GATTCGTTAA--GTTATTATGAATCACCAAGGAGCCCCGAAGG----------------- 292
||| | | ||||| || ||||||| || || | ||
Sbjct 121 GATCGGCCCAAGGTTATCTAGAGTCACCAAACAGGCCGGGGGGCCACCACGCGGCAGCGC 180
Query 293 ---GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTT-TTAGCA 346
||| |||||| ||| |||||| ||| | | || || ||| | | | || |||
Sbjct 181 CCCGCGCGGGTTTTAAGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTTTGCA 240
Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-CTATCAAATAAACGA 405
|||||||||||||||||| |||| |||||||| |||| | | | |||||| ||| |
Sbjct 241 TGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGGGTGAGCGATCAAAGGAACCA 300
Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465
||||||||||||||||||||||||||||||||| | | | ||||| ||||||
Sbjct 301 TAACTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCCGTGTGGACTTATACATGC 360
Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||| |||||||||||||||||| ||||||||||
Sbjct 361 ATGGCTTAAACTTTGAGACAAGCATATG-CTACTGGCAG 398
>seq156511
Length=173
Score = 215 bits (238), Expect = 2e-53
Identities = 154/173 (89%), Gaps = 3/173 (2%)
Strand=Plus/Plus
Query 54 ACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 113
||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACTACCTCCACGTGTCGTGAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 60
Query 114 AGCCGTTTCTCAGGCTCCCTCTCCGGAAT-CGAACCCT-AATTCCCCGTTACCCGTTGAT 171
|||| |||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct 61 AGCCATTTCTCAGGCTCCCTCTCCGGAATCCGAACCCTGACTTCCCCGTTACCCGTGGTC 120
Query 172 ACCATGGTAGGCCACTATCCTACCAT-CGAAAGTTGATAGGGCAGAAATTTGA 223
|||||||||||| || |||||| ||||||||||||||||||| ||| ||
Sbjct 121 ACCATGGTAGGCACATAGAGTACCATACGAAAGTTGATAGGGCAGACATTCGA 173
>seq380429
Length=606
Score = 194 bits (214), Expect = 5e-47
Identities = 260/357 (73%), Gaps = 26/357 (7%)
Strand=Plus/Plus
Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231
|||||||||||| || ||||||||||||||||||||||||| ||| |||||| |
Sbjct 1 ACCATGGTAGGCACATAGAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGTCG 60
Query 232 TCGCCGGCTCAAGGCCATGCGATTCGTTAA--GTTATTATGAATCACCAAGGAGCC---- 285
|||||| | || ||| | ||||| | | ||||| || ||||||| ||||
Sbjct 61 TCGCCGCCGCAGGGCGA-GCGATCGGCCCAAGGTTATCTAGAGTCACCAAACAGCCGGGG 119
Query 286 ---------CCGAAGGGC-----GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GA 329
| | || || | |||||| ||| |||||| ||| | | || ||
Sbjct 120 GCCACCACGCGGCAGCGCCCCGCGCGGGTTTTAAGTCTGATAAATGCACGCATCCCCGGA 179
Query 330 AGTCGGGGTTT-TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGG 388
||| | | | || ||||||||||||||||||||| |||| |||||||| |||| |
Sbjct 180 GGTCAGCGCTCGTTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGGGT 239
Query 389 TA-CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT 447
| | |||||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct 240 GAGCGATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCC 299
Query 448 GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| | ||||| ||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 300 GTGTGGACTTATACATGCATGGCTTAAACTTTGAGACAAGCATATG-CTACTGGCAG 355
>seq68951
Length=913
Score = 145 bits (160), Expect = 2e-32
Identities = 102/115 (89%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 818 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 759
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 116
| ||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 758 CACGTGTCGTGAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 704
>seq167005
Length=214
Score = 111 bits (122), Expect = 5e-22
Identities = 112/142 (79%), Gaps = 4/142 (3%)
Strand=Plus/Minus
Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTT-TTAGCATGTATTAG 354
|||||| ||| |||||| ||| | | || || ||| | | | || |||||||||||
Sbjct 142 GGTTTTAAGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTTTGCATGTATTAG 83
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-CTATCAAATAAACGATAACTGAT 413
|||||||||| |||| |||||||| |||| | | | |||||| ||| |||||||||
Sbjct 82 CTCTAGAATTGCCACAGTTATCCAAGTAGCGGGTGAGCGATCAAAGGAACCATAACTGAT 23
Query 414 TTAATGAGCCATTCGCAGTTTC 435
||||||||||||||||||||||
Sbjct 22 TTAATGAGCCATTCGCAGTTTC 1
>seq34637
Length=190
Score = 102 bits (112), Expect = 2e-19
Identities = 81/96 (84%), Gaps = 1/96 (1%)
Strand=Plus/Plus
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468
|||||||||||||||||||||||||||||| | | | ||||| |||||||||
Sbjct 39 CTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCCGTGTGGACTTATACATGCATG 98
Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||| |||||||||||||||||| ||||||||||
Sbjct 99 GCTTAAACTTTGAGACAAGCATATG-CTACTGGCAG 133
>seq54662
Length=231
Score = 98.7 bits (108), Expect = 3e-18
Identities = 80/97 (82%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452
|||||| ||| |||||||||||||||||||||||||||||||||| | | |
Sbjct 135 ATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCCGTGTG 194
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489
||||| ||||||||||||||| ||||||||||||||
Sbjct 195 GACTTATACATGCATGGCTTAAACTTTGAGACAAGCA 231
>seq5545
Length=46369
Score = 98.7 bits (108), Expect = 3e-18
Identities = 80/97 (82%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452
|||||| ||| |||||||||||||||||||||||||||||||||| | | |
Sbjct 2670 ATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCCGTGTG 2611
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489
||||| ||||||||||||||| ||||||||||||||
Sbjct 2610 GACTTATACATGCATGGCTTAAACTTTGAGACAAGCA 2574
>seq67313
Length=179
Score = 86.0 bits (94), Expect = 2e-14
Identities = 98/128 (77%), Gaps = 4/128 (3%)
Strand=Plus/Minus
Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTT-TTAGCATGTATTAG 354
|||||| ||| |||||| ||| | | || || ||| | | | || |||||||||||
Sbjct 128 GGTTTTAAGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTTTGCATGTATTAG 69
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAG-GTACTATCAAATAAACGATAACTGAT 413
|||||||||| |||| |||||||| |||| | | | |||||| ||| |||||||||
Sbjct 68 CTCTAGAATTGCCACAGTTATCCAAGTAGCGGGTGAGCGATCAAAGGAACCATAACTGAT 9
Query 414 TTAATGAG 421
||||||||
Sbjct 8 TTAATGAG 1
>seq4123
Length=86638
Score = 77.0 bits (84), Expect = 1e-11
Identities = 67/82 (82%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 423 CATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAG 482
|||||||||||||||| | | | ||||| ||||||||||||||| |||||||
Sbjct 62171 CATTCGCAGTTTCACTTTTCCAGCCGTGTGGACTTATACATGCATGGCTTAAACTTTGAG 62230
Query 483 ACAAGCATATGACTACTGGCAG 504
||||||||||| ||||||||||
Sbjct 62231 ACAAGCATATG-CTACTGGCAG 62251
>seq125680
Length=219
Score = 75.2 bits (82), Expect = 3e-11
Identities = 48/51 (94%), Gaps = 1/51 (2%)
Strand=Plus/Plus
Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||| ||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 13 ACTTATACATGCATGGCTTAAACTTTGAGACAAGCATATG-CTACTGGCAG 62
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503944142592
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