Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq367448 316 6e-84 seq341519 289 9e-76 seq387861 269 8e-70 seq356943 244 3e-62 seq156511 215 2e-53 seq380429 194 5e-47 seq68951 145 2e-32 seq167005 111 5e-22 seq34637 102 2e-19 seq54662 98.7 3e-18 seq5545 98.7 3e-18 seq67313 86.0 2e-14 seq4123 77.0 1e-11 seq125680 75.2 3e-11 >seq367448 Length=431 Score = 316 bits (350), Expect = 6e-84 Identities = 329/423 (78%), Gaps = 24/423 (6%) Strand=Plus/Plus Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTT 60 Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221 |||||| | |||||||||||| | ||||||||||||||||||||||||| ||| Sbjct 61 ACCCGTGGTCACCATGGTAGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTC 120 Query 222 GAATGAACCATCGCCGGCTCAA-GGCCATGCGATTCGTT--AAGTTATTATGAATCACCA 278 |||||| | || ||| | ||| || | ||||| | | | ||||| || |||||| Sbjct 121 GAATGAGACGTCACCGCCACAAAGGGCGCGCGATCGGCTCGAGGTTATCTAGAGTCACCA 180 Query 279 AGGAGCCCCG---AA--------GG---GCGTTGGTTTTTTATCTAATAAATACACCCCT 324 | | | || | || || || | |||||| ||| |||||| ||| | | Sbjct 181 AAGCGGCCGGGGCAACCGAGATTGGCCCGCATGGGTTTTGGGTCTGATAAATGCACGCAT 240 Query 325 TCC--GAAGTCGGGGTTTTTA-GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381 || || ||| | | | | ||||||||||||||||||||| |||| |||||||| || Sbjct 241 CCCCGGAGGTCAGCGCTCGTCTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGT 300 Query 382 A--GTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439 | || || | |||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 301 AACGTT-GGAGCGATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 359 Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499 || | | | ||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 360 TACCGGCCGTGTGTACTTAGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACT 418 Query 500 GGC 502 ||| Sbjct 419 GGC 421 >seq341519 Length=350 Score = 289 bits (320), Expect = 9e-76 Identities = 218/254 (86%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 76 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 135 Query 62 CCCGTGTCGGGAT-TGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | ||||||| || ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 136 CACGTGTCGTGAAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATT 195 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| Sbjct 196 TCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTA 255 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 256 GGCACATAGAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGTCGTCGCCGCCG 315 Query 241 CAAGGCCATGCGAT 254 | ||| | ||||| Sbjct 316 CGAGGGCGAGCGAT 329 >seq387861 Length=398 Score = 269 bits (298), Expect = 8e-70 Identities = 219/261 (84%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCAA---AAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||| || || | ||||| ||||||| ||||| | ||||||||| Sbjct 388 ACTCATTCCAATTACGAGGGCCTACGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 329 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 328 TCCACGTGTCGTGAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 269 Query 120 TTCTCAGG-CTCCCTCTCCGGAAT-CGAACCCT-AATTCCCCGTTACCCGTTGATACCAT 176 |||||||| ||||||||||||||| |||||||| | ||||||||||||||| | ||||| Sbjct 268 TTCTCAGGCCTCCCTCTCCGGAATCCGAACCCTGACTTCCCCGTTACCCGTGGTCACCAT 209 Query 177 GGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 ||||||| || ||||||||||||||||||||||||| ||| |||||| | ||||| Sbjct 208 GGTAGGCACATAGAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGTCGTCGCC 149 Query 237 GGCTCAAGGCCATGCGATTCG 257 | | | ||| | ||||| || Sbjct 148 GCCGCGAGGGCGAGCGATCCG 128 >seq356943 Length=570 Score = 244 bits (270), Expect = 3e-62 Identities = 294/399 (74%), Gaps = 27/399 (7%) Strand=Plus/Plus Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCC 191 ||||||||||||||||||| |||||||||||||||| | |||||||||||| || Sbjct 1 CTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGGCACATAGAG 60 Query 192 TACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGC 251 ||||||||||||||||||||||||| ||| |||||| | |||||| | | ||| | || Sbjct 61 TACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGTCGTCGCCGCCGCGAGGGCGAGC 120 Query 252 GATTCGTTAA--GTTATTATGAATCACCAAGGAGCCCCGAAGG----------------- 292 ||| | | ||||| || ||||||| || || | || Sbjct 121 GATCGGCCCAAGGTTATCTAGAGTCACCAAACAGGCCGGGGGGCCACCACGCGGCAGCGC 180 Query 293 ---GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTT-TTAGCA 346 ||| |||||| ||| |||||| ||| | | || || ||| | | | || ||| Sbjct 181 CCCGCGCGGGTTTTAAGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTTTGCA 240 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-CTATCAAATAAACGA 405 |||||||||||||||||| |||| |||||||| |||| | | | |||||| ||| | Sbjct 241 TGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGGGTGAGCGATCAAAGGAACCA 300 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465 ||||||||||||||||||||||||||||||||| | | | ||||| |||||| Sbjct 301 TAACTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCCGTGTGGACTTATACATGC 360 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||| |||||||||||||||||| |||||||||| Sbjct 361 ATGGCTTAAACTTTGAGACAAGCATATG-CTACTGGCAG 398 >seq156511 Length=173 Score = 215 bits (238), Expect = 2e-53 Identities = 154/173 (89%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 54 ACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 113 ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACTACCTCCACGTGTCGTGAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 60 Query 114 AGCCGTTTCTCAGGCTCCCTCTCCGGAAT-CGAACCCT-AATTCCCCGTTACCCGTTGAT 171 |||| |||||||||||||||||||||||| |||||||| | ||||||||||||||| | Sbjct 61 AGCCATTTCTCAGGCTCCCTCTCCGGAATCCGAACCCTGACTTCCCCGTTACCCGTGGTC 120 Query 172 ACCATGGTAGGCCACTATCCTACCAT-CGAAAGTTGATAGGGCAGAAATTTGA 223 |||||||||||| || |||||| ||||||||||||||||||| ||| || Sbjct 121 ACCATGGTAGGCACATAGAGTACCATACGAAAGTTGATAGGGCAGACATTCGA 173 >seq380429 Length=606 Score = 194 bits (214), Expect = 5e-47 Identities = 260/357 (73%), Gaps = 26/357 (7%) Strand=Plus/Plus Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 |||||||||||| || ||||||||||||||||||||||||| ||| |||||| | Sbjct 1 ACCATGGTAGGCACATAGAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGTCG 60 Query 232 TCGCCGGCTCAAGGCCATGCGATTCGTTAA--GTTATTATGAATCACCAAGGAGCC---- 285 |||||| | || ||| | ||||| | | ||||| || ||||||| |||| Sbjct 61 TCGCCGCCGCAGGGCGA-GCGATCGGCCCAAGGTTATCTAGAGTCACCAAACAGCCGGGG 119 Query 286 ---------CCGAAGGGC-----GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GA 329 | | || || | |||||| ||| |||||| ||| | | || || Sbjct 120 GCCACCACGCGGCAGCGCCCCGCGCGGGTTTTAAGTCTGATAAATGCACGCATCCCCGGA 179 Query 330 AGTCGGGGTTT-TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGG 388 ||| | | | || ||||||||||||||||||||| |||| |||||||| |||| | Sbjct 180 GGTCAGCGCTCGTTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGCGGGT 239 Query 389 TA-CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT 447 | | |||||| ||| |||||||||||||||||||||||||||||||||| | Sbjct 240 GAGCGATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCC 299 Query 448 GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | | ||||| ||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 300 GTGTGGACTTATACATGCATGGCTTAAACTTTGAGACAAGCATATG-CTACTGGCAG 355 >seq68951 Length=913 Score = 145 bits (160), Expect = 2e-32 Identities = 102/115 (89%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 818 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 759 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 116 | ||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 758 CACGTGTCGTGAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 704 >seq167005 Length=214 Score = 111 bits (122), Expect = 5e-22 Identities = 112/142 (79%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTT-TTAGCATGTATTAG 354 |||||| ||| |||||| ||| | | || || ||| | | | || ||||||||||| Sbjct 142 GGTTTTAAGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTTTGCATGTATTAG 83 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-CTATCAAATAAACGATAACTGAT 413 |||||||||| |||| |||||||| |||| | | | |||||| ||| ||||||||| Sbjct 82 CTCTAGAATTGCCACAGTTATCCAAGTAGCGGGTGAGCGATCAAAGGAACCATAACTGAT 23 Query 414 TTAATGAGCCATTCGCAGTTTC 435 |||||||||||||||||||||| Sbjct 22 TTAATGAGCCATTCGCAGTTTC 1 >seq34637 Length=190 Score = 102 bits (112), Expect = 2e-19 Identities = 81/96 (84%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 |||||||||||||||||||||||||||||| | | | ||||| ||||||||| Sbjct 39 CTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCCGTGTGGACTTATACATGCATG 98 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| |||||||||||||||||| |||||||||| Sbjct 99 GCTTAAACTTTGAGACAAGCATATG-CTACTGGCAG 133 >seq54662 Length=231 Score = 98.7 bits (108), Expect = 3e-18 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 |||||| ||| |||||||||||||||||||||||||||||||||| | | | Sbjct 135 ATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCCGTGTG 194 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 ||||| ||||||||||||||| |||||||||||||| Sbjct 195 GACTTATACATGCATGGCTTAAACTTTGAGACAAGCA 231 >seq5545 Length=46369 Score = 98.7 bits (108), Expect = 3e-18 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 |||||| ||| |||||||||||||||||||||||||||||||||| | | | Sbjct 2670 ATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTTTTCCAGCCGTGTG 2611 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 ||||| ||||||||||||||| |||||||||||||| Sbjct 2610 GACTTATACATGCATGGCTTAAACTTTGAGACAAGCA 2574 >seq67313 Length=179 Score = 86.0 bits (94), Expect = 2e-14 Identities = 98/128 (77%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTT-TTAGCATGTATTAG 354 |||||| ||| |||||| ||| | | || || ||| | | | || ||||||||||| Sbjct 128 GGTTTTAAGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTTTGCATGTATTAG 69 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAG-GTACTATCAAATAAACGATAACTGAT 413 |||||||||| |||| |||||||| |||| | | | |||||| ||| ||||||||| Sbjct 68 CTCTAGAATTGCCACAGTTATCCAAGTAGCGGGTGAGCGATCAAAGGAACCATAACTGAT 9 Query 414 TTAATGAG 421 |||||||| Sbjct 8 TTAATGAG 1 >seq4123 Length=86638 Score = 77.0 bits (84), Expect = 1e-11 Identities = 67/82 (82%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 423 CATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAG 482 |||||||||||||||| | | | ||||| ||||||||||||||| ||||||| Sbjct 62171 CATTCGCAGTTTCACTTTTCCAGCCGTGTGGACTTATACATGCATGGCTTAAACTTTGAG 62230 Query 483 ACAAGCATATGACTACTGGCAG 504 ||||||||||| |||||||||| Sbjct 62231 ACAAGCATATG-CTACTGGCAG 62251 >seq125680 Length=219 Score = 75.2 bits (82), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 1/51 (2%) Strand=Plus/Plus Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 13 ACTTATACATGCATGGCTTAAACTTTGAGACAAGCATATG-CTACTGGCAG 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503944142592