Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq9145 127 8e-24 seq1653 104 1e-16 >seq9145 Length=755 Score = 127 bits (140), Expect = 8e-24 Identities = 142/185 (77%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| | |||| || |||||||||||| ||| || | || ||||| | || |||||| Sbjct 357 CTCGATGAGCATGCCGATGGTCATGCGCGAGGGGAAGCCGTGGGGGTTGAAGAGGATGTC 416 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCAC--CAGGCCGTTG 449104 ||||| | |||| | | |||||||||||||||||| | | |||| | ||| | | Sbjct 417 GGGCGACATGCCGTTCTCCGTGAAGGGCATGTCCTCGGCG--GGCCACAGCCGGCTGAGG 474 Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC-CTGCTCGGGCTTGCGTGTGAA 449163 | |||||||||||||||||||||| |||||||||||| || | ||| ||||| | || Sbjct 475 ATGCCCTTCTGGCCGTGGCGGCTGGCGAACTTGTCCCCGATGGT-GGGGTTGCGCGGGAT 533 Query 449164 GCGCA 449168 ||||| Sbjct 534 GCGCA 538 >seq1653 Length=435402 Score = 104 bits (114), Expect = 1e-16 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| ||||| || ||||||||||||| || ||||| | ||||| Sbjct 324281 CTCCTTGAGACGGGGCACACCCAGAGTGACGTTCTTGGCCGACACTCCGGCGTAATGGAA 324340 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | ||| |||| ||||||| |||||| || | | ||||| | || ||| || || Sbjct 324341 GGTGTTGAGCGTCATCTGCGTGGCGGGCTCTCCCAGGGACTGGGCGGCCAGGGCTCCCAC 324400 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 324401 CATCTCACCGGG 324412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2073043856085746