Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gasterosteus_20aculeatus_20[genbank_20GCA_5F000180675.1_202006-02- 01] 16,957 sequences; 446,610,788 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq14842 84.2 3e-14 seq15037 80.6 3e-13 seq14982 80.6 3e-13 seq14950 80.6 3e-13 seq14867 80.6 3e-13 seq11622 80.6 3e-13 seq11617 80.6 3e-13 seq11614 80.6 3e-13 seq10112 80.6 3e-13 seq11624 73.4 5e-11 >seq14842 Length=15651 Score = 84.2 bits (92), Expect = 3e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 1751 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 1809 Query 70 TA--AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||||||||| ||||| |||| ||||| Sbjct 1810 ACCGAGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAA 1849 >seq15037 Length=12961 Score = 80.6 bits (88), Expect = 3e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 7446 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 7388 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||| ||||| |||| ||||| Sbjct 7387 ACCGGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAA 7348 >seq14982 Length=13690 Score = 80.6 bits (88), Expect = 3e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 6969 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 6911 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||| ||||| |||| ||||| Sbjct 6910 ACCGGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAA 6871 >seq14950 Length=6505 Score = 80.6 bits (88), Expect = 3e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 3529 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 3587 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||| ||||| |||| ||||| Sbjct 3588 ACCGGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAA 3627 >seq14867 Length=12646 Score = 80.6 bits (88), Expect = 3e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 6999 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 7057 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||| ||||| |||| ||||| Sbjct 7058 ACCGGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAA 7097 >seq11622 Length=15083 Score = 80.6 bits (88), Expect = 3e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 3263 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 3321 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||| ||||| |||| ||||| Sbjct 3322 ACCGGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAA 3361 >seq11617 Length=2758 Score = 80.6 bits (88), Expect = 3e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 1912 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 1970 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||| ||||| |||| ||||| Sbjct 1971 ACCGGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAA 2010 >seq11614 Length=4861 Score = 80.6 bits (88), Expect = 3e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 2348 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 2406 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||| ||||| |||| ||||| Sbjct 2407 ACCGGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAA 2446 >seq10112 Length=18371 Score = 80.6 bits (88), Expect = 3e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 9483 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 9541 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||| ||||| |||| ||||| Sbjct 9542 ACCGGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAA 9581 >seq11624 Length=8207 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| || ||||| ||| |||||| |||| Sbjct 1741 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATCATTCCTAGCTGCGGTATTCAGGCG 1799 Query 70 TAAG--CCTGCTTTGAACACTCT-AATTTTCTCAAGGTAAA 107 | ||||||||||||||||| | |||| |||| ||||| Sbjct 1800 ACCGGGCCTGCTTTGAACACTCTGATTTTTTTCAAAGTAAA 1840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595102225938