Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gasterosteus_20aculeatus_20[genbank_20GCA_5F000180675.1_202006-02- 01] 16,957 sequences; 446,610,788 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq15037 84.2 2e-14 seq14982 84.2 2e-14 seq14950 84.2 2e-14 seq14867 84.2 2e-14 seq11622 84.2 2e-14 seq11617 84.2 2e-14 seq11614 84.2 2e-14 seq10112 84.2 2e-14 seq14842 80.6 3e-13 seq11624 78.8 1e-12 seq10553 73.4 4e-11 >seq15037 Length=12961 Score = 84.2 bits (92), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||||| | || |||||| | | | Sbjct 7348 TTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 7407 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 7408 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 7446 >seq14982 Length=13690 Score = 84.2 bits (92), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||||| | || |||||| | | | Sbjct 6871 TTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 6930 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 6931 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 6969 >seq14950 Length=6505 Score = 84.2 bits (92), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||||| | || |||||| | | | Sbjct 3627 TTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 3568 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 3567 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 3529 >seq14867 Length=12646 Score = 84.2 bits (92), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||||| | || |||||| | | | Sbjct 7097 TTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 7038 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 7037 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 6999 >seq11622 Length=15083 Score = 84.2 bits (92), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||||| | || |||||| | | | Sbjct 3361 TTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 3302 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 3301 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 3263 >seq11617 Length=2758 Score = 84.2 bits (92), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||||| | || |||||| | | | Sbjct 2010 TTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 1951 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 1950 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 1912 >seq11614 Length=4861 Score = 84.2 bits (92), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||||| | || |||||| | | | Sbjct 2446 TTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 2387 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 2386 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 2348 >seq10112 Length=18371 Score = 84.2 bits (92), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||||| | || |||||| | | | Sbjct 9581 TTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 9522 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 9521 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 9483 >seq14842 Length=15651 Score = 80.6 bits (88), Expect = 3e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG--CCTTTGCTCGAATACATTACCATG 70 |||||||||||||||| |||| |||||||||||| | | || |||||| | | | Sbjct 1849 TTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCTCGGTCGCCTGAATACCGCAGCTAG 1790 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 1789 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 1751 >seq11624 Length=8207 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATT-AGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCAT 69 ||||||||||||||| | |||| |||||||||||||| | || |||||| | | Sbjct 1840 TTTACTTTGAAAAAAATCAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTA 1781 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||| || ||||||||| | |||| ||||||||| ||||| Sbjct 1780 GGAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 1741 >seq10553 Length=49669 Score = 73.4 bits (80), Expect = 4e-11 Identities = 78/100 (78%), Gaps = 5/100 (5%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||||||||| || |||||||||||||| | || |||||| | | | Sbjct 45484 TTTACTTTGAAAAAAT--CAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 45541 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||| || ||||||||| | |||| ||||||||| ||||| Sbjct 45542 GAATGATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 45580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511915893280