Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq847 113 8e-23 >seq847 Length=162446 Score = 113 bits (124), Expect = 8e-23 Identities = 165/229 (72%), Gaps = 7/229 (3%) Strand=Plus/Plus Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||| |||||||||||||| | || |||||| | | || Sbjct 67525 TACTTTGAAAAAATTAGAGTTTTCAAAGCAGGCCTGGTCGCCTGAATACCGCAACTACGA 67584 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTTCT---AGGACCGCCGTAATGA 189 ||||| |||||| || | ||||||||||||| || ||||| | || | | ||| Sbjct 67585 ATAATGGAATAGTAC-TCTGGTTCTATTTTGTGGGTTTTCTGTCTGAACTGGGGCCGTGA 67643 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||||| |||||| | |||||| | |||||||||||||||||| Sbjct 67644 TTAAGAGGGACGCCCGGGGGCATTCGTATTCTGCCGCTAGAGGTGAAATTCTTGGACCGG 67703 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 ||||| || | | |||||| || |||| |||||||||||||| Sbjct 67704 CGCAAGACAGACGAAAGAGAAAGCATTTGTCAAGAATGTTTTCATTAAT 67752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915126774848