Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq146 192 9e-47 seq148 129 9e-28 seq25 120 5e-25 seq37 91.5 2e-16 >seq146 Length=1442430 Score = 192 bits (212), Expect = 9e-47 Identities = 176/218 (81%), Gaps = 7/218 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||| ||| |||||| ||| | ||||||||||||||||||||||||||||||| || Sbjct 948000 TCAGTGTGGCGTGCGTGCACCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 947942 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA---- 131 || || | |||||| | |||| | |||||||||||||| | | | ||| | Sbjct 947941 AATCT-CGTGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACTCGGACCGCACGGG 947883 Query 132 GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 ||||| | ||| |||||| || |||||| ||||||||||||| |||||||||||| Sbjct 947882 GTCGA-GTAACTAGTTAGCATGTCGGAGTCTCGATCGTTATCGGAATCAACCAGACAAAT 947824 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCA 229 ||||||||| |||||||||||||||||||||||||||| Sbjct 947823 CACTCCACCCACTAAGAACGGCCATGCACCACCACCCA 947786 >seq148 Length=1429459 Score = 129 bits (142), Expect = 9e-28 Identities = 99/117 (85%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| || |||||||||||||| |||||||||||||||||| |||||| Sbjct 998201 CTAGTTAGCATGTCGTAGTCTCGTTCGTTATGGGAATTAACCAGACAAATTGCTCCACAC 998142 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||| |||| |||| |||||| ||||||||||||||| ||||| Sbjct 998141 ACTAAGAACGGCCATG---CACCTCCCACAGAATCGAGAAAGAGCTATCAACCTGTC 998088 >seq25 Length=3272143 Score = 120 bits (132), Expect = 5e-25 Identities = 99/120 (83%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| || | | || ||| ||||||||||||||||||||||| |||||||| Sbjct 1668737 CTAGTTAGCATGTCACAATTTCATTCATTATCGGAATTAACCAGACAAATTGCTCCACCA 1668796 Query 202 ACTAAGAACGGCCATGCA---CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||| |||||| |||||||||||||||| |||| Sbjct 1668797 ACTAAGAACGGCCATTCAGGGGAGCCACCCACAGAATCGAGAAAGAGCTATCAATTTGTC 1668856 >seq37 Length=3002544 Score = 91.5 bits (100), Expect = 2e-16 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||||||||||||||| |||||||||||||||||| || ||| ||||| ||||||||| Sbjct 1441206 CTCCACCAACTAAGAACAGCCATGCACCACCACCCACAGGATCCAGAAATAGCTATCAAG 1441147 Query 254 CTGTC 258 ||||| Sbjct 1441146 CTGTC 1441142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796738240281