Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq21642 129 9e-28 seq904 89.7 8e-16 >seq21642 Length=279 Score = 129 bits (142), Expect = 9e-28 Identities = 164/219 (75%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| ||||| ||| || || ||| |||| ||||||||||| | Sbjct 267 GTACAAAGGGCAGGGACTTAGTCGGCGC-AGTCTGGTGAACTGCGCCTACTAGGAATT-C 210 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| | | | |||||||| | ||||| |||| | ||| | ||| || Sbjct 209 CTCGTTCATGGGACATAATTGCAAACCCCAATCCCATATACGACCAGTTTTAACAAGGTT 150 Query 120 ACCCGGA-CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| |||||||| ||| |||| || |||| || |||||| ||||||| Sbjct 149 ACCCGACTCCTGTCGGAGCAGGGAATAG-CTTGTTGTGCTGGCCATTGTAGCACGCGTGC 91 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||||||||||||| || Sbjct 90 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATGGC 52 >seq904 Length=82882 Score = 89.7 bits (98), Expect = 8e-16 Identities = 63/71 (89%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 163 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 ||||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||||| Sbjct 21621 AGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAA 21679 Query 223 ACTTCCGTGGC 233 || |||||| Sbjct 21680 TCTCGCGTGGC 21690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751727708555