Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq809 145 3e-32 seq968 131 7e-28 seq1243 122 4e-25 seq822 120 1e-24 seq1492 104 1e-19 >seq809 Length=886213 Score = 145 bits (160), Expect = 3e-32 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| Sbjct 173568 GGACCCGAAAGATGGTGAACTATGCCTTGGCAGGGCGAAGCCAGAGGAAAGTCTGGTGGA 173509 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||| ||| ||||||||||||||||| | ||| ||||||||||| Sbjct 173508 GGCCCGCAGCGGTCCTGACGTGCAAATCGATCGTCCGACCTGGTTATAGGGGCGA 173454 >seq968 Length=220680 Score = 131 bits (144), Expect = 7e-28 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 164417 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCAAAGCCAGAGGAAACTCTGGTGGA 164358 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| |||||| || || ||||| ||||| ||| | | ||||||||||||||| Sbjct 164357 GGCCCGCAGCCGTCGTGACGTGCCAATCGGTCGACCGACCTGGGTATAGGGGCGA 164303 >seq1243 Length=518002 Score = 122 bits (134), Expect = 4e-25 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 50 GTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGA 109 ||||||||||||||| | || ||| |||||| | | ||||| |||||||| ||| || Sbjct 192177 GTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAATACCGGCACGA 192118 Query 110 GACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAA 169 ||||||||||| ||||||| | | ||||| ||||||| |||||| | |||||||| | Sbjct 192117 GACCGATAGCGGACAAGTACCTTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCA 192058 Query 170 AAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 | || ||||||| ||||| ||| || || Sbjct 192057 ACAGGGCGTGAAACCGTTGAGAGGTAAACG 192028 >seq822 Length=457018 Score = 120 bits (132), Expect = 1e-24 Identities = 77/84 (92%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 49406 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 49347 Query 629 GGCTCGCAGCGGTTCTGGCGTGCA 652 ||| ||||||||| ||| |||||| Sbjct 49346 GGCCCGCAGCGGTCCTGACGTGCA 49323 >seq1492 Length=935475 Score = 104 bits (114), Expect = 1e-19 Identities = 90/112 (80%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||||||||||||||||||| || ||| |||| |||| ||||||||||||||| ||| Sbjct 691674 GGACCCGAAAGATGGTGAACTTTGACTGGGCAGGGCGAAGTCAGAGGAAACTCTGGCGGA 691733 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||| ||||| | | ||| ||||||||| ||||| | | ||| |||||| Sbjct 691734 GGCCCGCAGTGATCCTGACGTGCAAATAAGTCGTCCGACCTCGGTCTAGGGG 691785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079198263350