Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq26129 167 6e-39 seq11851 100 7e-19 >seq26129 Length=392 Score = 167 bits (184), Expect = 6e-39 Identities = 214/293 (73%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 64 AGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTG 123 ||||||| |||||| | |||| ||||| || || |||||| |||||| |||| ||| Sbjct 390 AGCGTTATCCGGAATCATTGGGTTTAAAGGGTCCGTAGGCGGGCCTGTAAGTCAGGGGTG 331 Query 124 AAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 ||| || |||| |||| || | ||| ||| |||||| | || |||| | | | Sbjct 330 AAAGGCCACGGCTCAACCGTGGGACTGCCCTTGATACTGCAGGTCTTGAGTCGTTGTGGG 271 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 | | |||| ||||||| ||||||||| ||||||| ||||||| || || Sbjct 270 GTTGCCGGAACATGTGGTGTAGCGGTGAAATGCATAGATATCACATAGAACACCGATCGC 211 Query 244 GAAGGCAGCCCCCTGGGATAAC--ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||| | | ||| ||||||||| ||| ||||||||||||||||| ||| Sbjct 210 GAAGGCAGGTGACCA--ACAACGAACTGACGCTGATGGACGAAAGCGTGGGGAGCGAACG 153 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG 354 ||||||||||||| ||||||||||||| |||||||| ||||| ||| ||| Sbjct 152 GGATTAGATACCCCGGTAGTCCACGCCGTAAACGATGGACACTAGCTGTCGGG 100 >seq11851 Length=225 Score = 100 bits (110), Expect = 7e-19 Identities = 105/132 (80%), Gaps = 7/132 (5%) Strand=Plus/Minus Query 208 GTGAAATGCGTA--GA-TATGTGGA--GGAACACCAATG-GCGAAGGCAGCCCCCTGGGA 261 ||||||| ||| || |||||| | ||| | ||| | |||||||| || ||| | Sbjct 158 GTGAAATCTGTATTGAGTATGTGTAAAGGAGCGCCAGTTAGCGAAGGCGGCTTTTTGGCA 99 Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 ||| ||||||| | | | ||||||||||||||||||||||||||| |||||||||||||| Sbjct 98 TAA-ACTGACGTTGAGGGACGAAAGCGTGGGGAGCAAACAGGATTCGATACCCTGGTAGT 40 Query 322 CCACGCCCTAAA 333 |||||| |||| Sbjct 39 CCACGCTGTAAA 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289117986208