Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq24519 390 3e-106 >seq24519 Length=344 Score = 390 bits (432), Expect = 3e-106 Identities = 287/333 (86%), Gaps = 1/333 (0%) Strand=Plus/Plus Query 164 TGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAA 223 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAA 60 Query 224 CCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAAC 283 |||| ||||||||||||||| ||||||||||||||| |||||||||||| || | Sbjct 61 CCCTCGCCTTTAGTTGCCATCATTTAGTTGGGCACTCTAAAGGGACTGCCGGTGATAAGC 120 Query 284 CGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGT 343 |||||||||||||||| |||||||| || ||||| |||||| | |||||||||||||| Sbjct 121 CGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTACGGGCTGGGCTACACACGT 180 Query 344 GCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTT 403 |||||||||| ||| ||||||||| ||||||||||| ||| |||| | |||| Sbjct 181 GCTACAATGGTGGTGACAGTGGGCAGCGAGACCGCGAGGTCGAGCTAATCTCCAAAAG-C 239 Query 404 GTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATC 463 |||||||||||||||| |||||||||||| |||||| ||||||||||||||||| Sbjct 240 CATCTCAGTTCGGATTGTTCTCTGCAACTCGAGAGCATGAAGTTGGAATCGCTAGTAATC 299 Query 464 GTAGATCAGCATGCTACGGTGAATACGTTCCCG 496 || ||||||||||| |||||||||||||||||| Sbjct 300 GTGGATCAGCATGCCACGGTGAATACGTTCCCG 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503437849920