Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq21039 131 3e-28 >seq21039 Length=269 Score = 131 bits (144), Expect = 3e-28 Identities = 150/199 (75%), Gaps = 11/199 (6%) Strand=Plus/Minus Query 44 GGAGCCGCTGTTGGGATACTACCCCTGTTGTA-TTGGATTTCTAACCGGACGACGTATAA 102 |||||||| ||| |||| |||| | || || || |||| |||||| |||| || Sbjct 206 GGAGCCGCCCTTGAAATACCACCCTTCTTATACTTAGATT-CTAACCCCACGA-----AA 153 Query 103 CCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTA 162 | | ||||| |||| | ||| ||||||||||||| |||||||||| |||||||| Sbjct 152 CTGG----GGGACCGTGTGTGGTGGGTAGTTTGACTGGGGTGGTCGCCTCCTAAAGAGTA 97 Query 163 ACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCA 222 |||||||| | ||||| |||||||||| ||| ||| || |||||| | || | | | | | Sbjct 96 ACGGAGGCTCGCAAAGGTACCCTCAGCATGGTTGGTAATCATGCGTAGAGCGTATAAGTA 37 Query 223 AAAGGGTGTTTGACTGCGA 241 ||||||| ||||||| || Sbjct 36 CAAGGGTGCTTGACTGAGA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982032808352