Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq22682 181 2e-43 >seq22682 Length=300 Score = 181 bits (200), Expect = 2e-43 Identities = 199/266 (75%), Gaps = 14/266 (5%) Strand=Plus/Plus Query 71 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGAT 130 |||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||| Sbjct 1 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTTGCTGAT 60 Query 131 CATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCT 190 |||||||| | ||||| || |||||| | |||||| ||||||||| ||||||||| || Sbjct 61 CATCCTCTAAAACCAGCTATAGATCGTAGGCTTGGTAGGCCATTACCCCACCAACTACCT 120 Query 191 AATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAG 250 |||| || |||| ||| | ||| | || ||||| |||| || Sbjct 121 AATCTAACGCGGGCTAATCCTTTGGCGATA------AA--------TCTTTCCCCCGAAG 166 Query 251 GACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCT 310 | | || |||||||| ||||||||| | | ||| || || | |||| ||||| Sbjct 167 GGCTCATACGGTATTACTCTCCGTTTCCAGAGGCTATTCCGTACCAAAGGGCATATTCCC 226 Query 311 AGGCATTACTCACCCGTCCGCCGCTC 336 | || ||||| ||||||||||||||| Sbjct 227 ACGCGTTACTAACCCGTCCGCCGCTC 252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071599318560