Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq22682 170 4e-40 >seq22682 Length=300 Score = 170 bits (188), Expect = 4e-40 Identities = 199/268 (74%), Gaps = 17/268 (6%) Strand=Plus/Plus Query 37 ATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTT 96 || |||||||||||||||||||||||||||||||||||||||||||||| ||| || | | Sbjct 1 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTTGCTGAT 60 Query 97 CAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCT 156 || ||||| | || |||| |||||| |||||||| ||| |||| | |||||||||||| Sbjct 61 CATCCTCTAAAACCAGCTATAGATCGTAGGCTTGGTAGGCCATTACCCCACCAACTACCT 120 Query 157 AATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTC 216 |||| |||| || ||| || ||||||||||||| | ||| | || Sbjct 121 AATCTAACGCGGGCTAATCCTTTGGCGATAAATCTTT--CCCCCGAAGG--GC------- 169 Query 217 TGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTG 276 | || |||||||| | |||||||| | | |||||| | || |||| || Sbjct 170 -----TCATACGGTATTACTCTCCGTTTCCAGAGGCTATTCCGTACCAAAGGGCATATT- 223 Query 277 CTCACGTGTTACTCACCCGTCCGCCACT 304 | |||| |||||| ||||||||||| || Sbjct 224 CCCACGCGTTACTAACCCGTCCGCCGCT 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998026828032