Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq26129 105 1e-20 >seq26129 Length=392 Score = 105 bits (116), Expect = 1e-20 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| | |||||||||||| | | | | |||||||| | ||||| Sbjct 162 CCCACGCTTTCGTCCATCAGCGTCAGTTCGTTGTTGGTCACCTGCCTTCGCGATCGGTGT 221 Query 61 TCCTCCGT-ATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119 || | || ||||||| ||||||||||||||||| ||||| || | | | | Sbjct 222 TC-TATGTGATATCTATGCATTTCACCGCTACACCACATGTTCCGGCAACCCCACAACGA 280 Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||||| |||| |||| |||| | ||||||||| |||||| ||||| Sbjct 281 CTCAAGACCTGCAGTATCAAGGGCAGTCCCACGGTTGAGCCGTGGCCTTTCACCCCTGAC 340 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCT 229 || | ||||||||| ||||||| ||||||| | ||||||||||||| Sbjct 341 TTACAGGCCCGCCTACGGACCCTTTAAACCCAATGATTCCGGATAACGCT 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828499900067