Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq22682 138 3e-30 >seq22682 Length=300 Score = 138 bits (152), Expect = 3e-30 Identities = 115/141 (82%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 150 AGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC 209 ||||| ||||||| |||||| |||||||| ||||| ||| ||||||| | |||||| Sbjct 141 AGGATTAGCCCGCGTTAGATTAGGTAGTTGGTGGGGTAATGGCCTACCAAGCCTACGATC 82 Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269 |||| | | ||||| ||||| || ||| ||| |||||||||||| ||| ||||||| Sbjct 81 TATAGCTGGTTTTAGAGGATGATCAGCAACACTGGGACTGAGACACGGCCCAGACTCCTA 22 Query 270 CGGGAGGCAGCAGTGGGGAAT 290 ||||||||||||||||||||| Sbjct 21 CGGGAGGCAGCAGTGGGGAAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497040242048