Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq21642 147 4e-33 seq904 95.1 2e-17 >seq21642 Length=279 Score = 147 bits (162), Expect = 4e-33 Identities = 166/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || ||||||||||||||||||||||||||||||||||||||||||| |||||| || | Sbjct 52 GCCATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACAATGGC-C 110 Query 174 AGC-CAACGAGTTCATCACCTTGGCCGGAAGGTCT-GGGTAATCTTGTTAAACTCTGTCG 231 ||| |||| || | || ||| ||| ||| | |||||| ||||||||| |||| Sbjct 111 AGCACAACAAGCT-ATTCCCTGCTCCGACAGGAGTCGGGTAACCTTGTTAAAACTGGTCG 169 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 | ||||| | | |||||||||| | | | |||||||||| ||||||| |||| Sbjct 170 TATATGGGATTGGGGTTTGCAATTATGTCCCATGAACGAGGAATTCCTAGTAGGCGCAGT 229 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||| ||| || || |||||||||||||||| Sbjct 230 TCACCAGACTGCGCCGACTAAGTCCCTGCCCTTTGTA 266 >seq904 Length=82882 Score = 95.1 bits (104), Expect = 2e-17 Identities = 82/98 (84%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | | || ||||| |||||||||||||||| Sbjct 21716 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACGCGAGATTGAG-CAATAACAGGTCTGTG 21659 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 |||||||||||||| | |||| |||||||||| ||||| Sbjct 21658 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACT 21621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946845965056