Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq20945 73.4 7e-11 >seq20945 Length=268 Score = 73.4 bits (80), Expect = 7e-11 Identities = 89/120 (74%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || || ||||| |||||||| ||| | |||||||||||||||| || ||||| | Sbjct 133 AGGGCGCATGGGGGATGCCTAGGCTCCCAGAGGCGATGAAGGACGTGATAAGCTGCGAAA 192 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 | | ||||||| ||| || | |||||||| | | ||||||||||| |||||||| Sbjct 193 ATCCACGGGGAG-CTGCACACGAGCATTGATCCGTGGGTGTCCGAATGGGGCAACCCGGC 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918056729632