Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq22682 127 4e-27 >seq22682 Length=300 Score = 127 bits (140), Expect = 4e-27 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 157 ATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGAC 216 ||||| |||||||||||||||||||||| ||| |||||||||||| ||| ||| | || Sbjct 1 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTTGCTGAT 60 Query 217 CTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCT 276 | |||||| | | | |||| |||||||||| ||| |||| ||||||| || ||||||| Sbjct 61 CATCCTCTAAAACCAGCTATAGATCGTAGGCTTGGTAGGCCATTACCCCACCAACTACCT 120 Query 277 AATGGAACGC 286 ||| ||||| Sbjct 121 AATCTAACGC 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068400514624