Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq3877 93.3 1e-14 >seq3877 Length=200 Score = 93.3 bits (102), Expect = 1e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 2518 AAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAA 2577 || ||||| |||||| | ||||||||||||||||| || ||||| ||||| || |||||| Sbjct 15 AAGTACCCCATCATCTCCATCGAAGATGGTATGGATGAGAACGATTGGGATGGATGGAAA 74 Query 2578 TCTCTT-ACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAAC 2636 || || || ||| | ||| |||||| |||||||| ||||| || || || ||||| Sbjct 75 -CTATTGACCGAAAAAGTGGGTAATAAAGTCCAATTGGTGGGTGATGATTTGTTTGTAAC 133 Query 2637 TAA 2639 || Sbjct 134 CAA 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155969142063588