Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq8 73.4 5e-11 >seq8 Length=30410158 Score = 73.4 bits (80), Expect = 5e-11 Identities = 84/112 (75%), Gaps = 7/112 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| || | ||| ||||| |||||||| ||| | |||||| |||| Sbjct 26686319 AAACCCACAAAATAGAACCGGA-GTCATATTCCATTATTCCTAGCTCAGGTATTCTGGCG 26686261 Query 70 TAA------GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 |||||||||||| ||||||||||| |||| ||||| | || || Sbjct 26686260 AGTTGGGCGGCCTGCTTTGAAGACTCTAATTTTTTCAAAGTAAATGCCCCGG 26686209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595146139794