Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-15 >seq8 Length=30410158 Score = 87.8 bits (96), Expect = 2e-15 Identities = 92/120 (77%), Gaps = 7/120 (6%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC------TTTGCTCGAA 58 || || | ||||||||||||||||||||| ||||||||||||| | || ||| Sbjct 26686209 CCGGGGCATTTACTTTGAAAAAATTAGAGTCTTCAAAGCAGGCCGCCCAACTCGCCAGAA 26686268 Query 59 TACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACC 118 ||| | | | |||||||| ||||| ||| | |||||||||||||| ||||| || ||| Sbjct 26686269 TACCTGAGCTAGGAATAATGGAATATGAC-TCCGGTTCTATTTTGTGGGTTTTCAGAACC 26686327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511953668640