Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq178 77.0 5e-12 seq63 77.0 5e-12 >seq178 Length=921585 Score = 77.0 bits (84), Expect = 5e-12 Identities = 72/91 (79%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 |||||||| | |||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 731175 GTTATCGGTTGTGACCAGACAAATCGTTCCACCAACTAAGAACGGCCATG---CACCACC 731231 Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | |||| | ||||| || | || ||||| Sbjct 731232 TACAGAACTGACAAAGAACTGTTAAGCTGTC 731262 >seq63 Length=2548741 Score = 77.0 bits (84), Expect = 5e-12 Identities = 68/84 (81%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 176 AATTAACCAGACAAATCACTCCACCAACT-AAGAACGGCCATGCACCACCACCCATAGAA 234 ||||||| |||||||| |||||| | || || || | |||||||| | ||| |||| Sbjct 626178 AATTAACTAGACAAATAGCTCCACTAGCTGAAAAATGAGTATGCACCATTATCCACAGAA 626119 Query 235 TCAAGAAAGAGCTATCAATCTGTC 258 ||||||| |||||||||||||||| Sbjct 626118 TCAAGAATGAGCTATCAATCTGTC 626095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796776279513