Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq86 158 1e-33 seq5694 147 2e-30 seq1459 127 2e-24 seq80 116 3e-21 seq72 87.8 1e-12 >seq86 Length=1688118 Score = 158 bits (174), Expect = 1e-33 Identities = 567/872 (65%), Gaps = 31/872 (4%) Strand=Plus/Minus Query 65711 CAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGT 65770 ||||| | ||| || ||||| | || || ||||| || ||| | || || | Sbjct 230305 CAGCTTGCCTCAAGGGCGGCGTAGTAGATCGTCTCAAAGATGTGAATGTTCAGCAACTGG 230246 Query 65771 GCCTCATCGCTCTCGTACGGCATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAAC 65829 ||||| ||| || |||| |||| ||| |||| || | ||| |||| ||| ||||| Sbjct 230245 GCCTCTGGGCTTTCAAACGGG-TACCGCATGAGGATGAAGGCGTCAGCCAAACCCTGAAC 230187 Query 65830 TCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGT 65888 || ||||| || || | |||||| || || | ||||| |||| |||||||| ||| Sbjct 230186 GCCGATACCAATCGGCCTGTGACGCTTGTTTGA-CTTCTCGGCCTCCGGTACAGGATAGA 230128 Query 65889 AATTGATATCGATAATGCGATTCAAATTGCGTGTC-ACCACATGCACGATACGTC-GCAA 65946 | ||||| ||||| || ||||| || | || | | || | || |||| || | Sbjct 230127 AGTTGATCTCGATGATCTTGTTCAAGTT-CTTGACGATAACTTTGGTGA--CGTCAGCTA 230071 Query 65947 TTGTTCGAAA-TCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAA 66005 | | ||| |||||| | || || | ||| ||| || || | Sbjct 230070 GTTTCTTAAAGTCAAAA------GTCCGCTCAGAGGTG---------ACATACATGTTGA 230026 Query 66006 GGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTT 66065 | |||| || || || || || || |||| || ||| | ||| || || || |||| Sbjct 230025 GTGCAATGGAAGCCAGATTACAAACGGCTACTTCATCATGGCTGGTGTATTCAACGATTT 229966 Query 66066 CGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGC 66125 | ||||| || || |||| |||||||||| |||||| || || |||| | |||| Sbjct 229965 CTGTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGTTGGTCTTTCTGTTGC 229906 Query 66126 ATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGT 66185 | || || || || | |||||| ||||| || || || |||||||| ||||| |||| Sbjct 229905 AGGCGTCTTTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGGACTCGATGATTGCGT 229846 Query 66186 GCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTA--ATGTTC 66243 |||| | | || |||||| ||| | |||| || | || || | || Sbjct 229845 GCCACACCTGCTGAGCTTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATGAGGT-- 229788 Query 66244 GTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACA 66303 ||| || | || || || ||||| || ||| | || |||| | ||||| Sbjct 229787 GTAAAGCTTCTCAAACTCCTCCCCCCAGCACTCATCCAGCCCAGGGCACTCATTAGGACA 229728 Query 66304 CATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAG 66363 |||||| ||||| || | ||||| | ||| || || || || ||||| | Sbjct 229727 CATCAGAGACCAGTCCTGGTTGCTCTCTACTCTTTTCATGAACAGGTCGGGGATCCACAT 229668 Query 66364 GGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGA 66422 |||||||||||| || | |||| |||||||| | || ||| || || || || | Sbjct 229667 GGCGTAGAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCA 229609 Query 66423 GGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTT 66482 ||| ||||| | || ||||| || || ||||| |||||||| | || | || Sbjct 229608 AGAAGTCAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGCGAAGGCTCCGGGCCTTT 229549 Query 66483 TGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGA 66542 || ||||| |||||||| || || || |||||| | || | || ||| || || | Sbjct 229548 TGTTTCCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACACTCTCAGCATGGGGACAA 229489 Query 66543 GCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 | ||||| || |||||||| |||||| | ||| Sbjct 229488 GACCGTTTGAGTTGCCATTTGTGCCGGCAATG 229457 >seq5694 Length=14491 Score = 147 bits (162), Expect = 2e-30 Identities = 380/573 (66%), Gaps = 7/573 (1%) Strand=Plus/Plus Query 66005 AGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATT 66064 || |||| || || || || || || |||| || ||| | ||| || || || ||| Sbjct 69 AGTGCAATGGAAGCCAGATTACAAACGGCTACTTCATCATGGCTGGTGTATTCAACGATT 128 Query 66065 TCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTG 66124 || ||||| || || |||| |||||||||| |||||| || || |||| | ||| Sbjct 129 TCTGTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGTTGGTCTTTCTGTTG 188 Query 66125 CATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCG 66184 || || || || || | |||||| ||||| || || || |||||||| ||||| ||| Sbjct 189 CAGGCGTCTTTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGGACTCGATGATTGCG 248 Query 66185 TGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTA--ATGTT 66242 ||||| | | || |||||| ||| | |||| || | || || | || Sbjct 249 TGCCACACCTGCTGAGCTTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATGAGGT- 307 Query 66243 CGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGAC 66302 ||| || | || || || ||| ||| | ||| | || |||| | |||| Sbjct 308 -GTAAAGCTTCTCAAACTCCTCCCCCAGCACT-CATCCAGCCCAGGGCACTCATTAGGAC 365 Query 66303 ACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGA 66362 ||||||| ||||| || | ||||| | ||| || || || || ||||| | Sbjct 366 ACATCAGAGACCAGTCCTGGTTGCTCTCTACTCTTTTCATGAACAGGTCGGGGATCCACA 425 Query 66363 GGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCG 66421 |||||||||||| || | |||| |||||||| | || ||| || || || || Sbjct 426 TGGCGTAGAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCC 484 Query 66422 AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGT 66481 | ||| ||||| | || ||||| || || ||||| |||||||| | || | | Sbjct 485 AAGAAGTCAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGCGAAGGCTCCGGGCCTT 544 Query 66482 TTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACG 66541 ||| ||||| |||||||| || || || |||||| | || | || ||| || || Sbjct 545 TTGTTTCCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACACTCTCAGCATGGGGACA 604 Query 66542 AGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 || ||||| || |||||||| |||||| | ||| Sbjct 605 AGACCGTTTGAGTTGCCATTTGTGCCGGCAATG 637 >seq1459 Length=39823 Score = 127 bits (140), Expect = 2e-24 Identities = 102/123 (83%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| | |||||||| || ||| ||||||| || ||||||||||| ||||||| Sbjct 13723 TGGAGCGCTTCACTCAGGAGGTCCAGGTGACGGAGGCCCGGTGTTTCTACGGGTTCCAGA 13664 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||| ||||||||||| | |||||| | || |||||||| | Sbjct 13663 TCGCCATGGAGAACATCCACTCCGAGATGTACAGCCTCCTCATCAACACCTACATCAGAG 13604 Query 61376 AGC 61378 ||| Sbjct 13603 AGC 13601 >seq80 Length=1733396 Score = 116 bits (128), Expect = 3e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 || ||||||||||| || |||||||| || || | |||||||||| |||||| || Sbjct 121976 GTGTACTCGACAATCTCTGTGCACAGGTTGCTAGACTTGATGGTGCCCAGATTCTGCTGG 122035 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| | |||||||| |||||||| | |||||| || || || || || || Sbjct 122036 TTGCTCTTCCTGTTGCATGCGTCCTTGTAGAGCATGTATGGTGTACCAGTTTCTGTCTGA 122095 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 |||||||||||||| |||||||| | ||||||||| Sbjct 122096 GACTCAATGATGGCATGCCAAAGCTGCTGAGCCTTCACC 122134 >seq72 Length=1853568 Score = 87.8 bits (96), Expect = 1e-12 Identities = 91/118 (77%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 61259 AACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318 || |||| || ||||||||||| || |||| || || | |||||| |||| ||||| Sbjct 1653618 AAGGTTTAGC-CAGGAGGTGCAGGTTGCGGAAGCACGCTCCTTCTACAGCTTTCAGATCC 1653560 Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||| |||| ||| ||||| ||||||||||| | || ||| | || ||||||||||| Sbjct 1653559 TCATTGAGACTGTTCACTCAGAGATGTACAGCATGCTTATCAACACTTACATCAGGGA 1653502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397502752382240