Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq183 98.7 4e-15 >seq183 Length=1044705 Score = 98.7 bits (108), Expect = 4e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| || ||| || ||||||||| || ||| || | |||||||| | || |||||| Sbjct 602636 CTCGATCAGCATCCCGATGGTCATGCGGGAGGGGAAGCCGTGCGGGTTGAAGAGGATGTC 602577 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103 || ||| |||| | | |||||||||||||||| ||| | ||| ||||| | | Sbjct 602576 CGGAGTCATGCCGCTCTCCGTGAAGGGCATGTCCTC--GGTCGGCCA-CAGGCGGCTCAG 602520 Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 || |||||||| |||||||| ||| ||||||||| || Sbjct 602519 GATTCCCTTCTGACCGTGGCGACTGGCGAACTTGTCTCC 602481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084635004734784