Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq70 82.4 9e-14 >seq70 Length=267082 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 9 GAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68 |||||| ||||||||| || | ||||||||| | |||||| ||| || ||| ||| Sbjct 41776 GAAACCCACAAAATAGAACCGGA-GTCCTATTCCAGTATTCCTAGCTGCGGTGTTCAGGC 41834 Query 69 GTAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||| |||||||||||||||||| ||||| |||| ||||| Sbjct 41835 GTACCGGCCTGCTTTGAACACTCTCATTTTTTCAAAGTAAA 41875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595188894684