Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq20 320 5e-85 seq98 264 4e-68 seq3 237 5e-60 seq9 91.5 5e-16 seq25 87.8 6e-15 seq4 86.0 2e-14 >seq20 Length=14739584 Score = 320 bits (354), Expect = 5e-85 Identities = 337/438 (77%), Gaps = 18/438 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| | || |||| | |||||| | |||||||||| Sbjct 3243197 CTTCTGCTCCACGGGAGGTTTCTGTCCACCCTGAGCTCGCCTTAGAATACCTGCGTTACC 3243256 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| | || | | ||||||||| ||||||||||||| | || |||| | ||| || Sbjct 3243257 ATTTGAGAGGTATACCGCCCCAGTCAAACTCCCCACCCGCCACTGTCTCCGGAGCGGGTC 3243316 Query 127 G--GCCCGCGAAGGACCTTAACGCCAGAAAATG-GTCGGTGAAGACCAGTTCCGCTTCAT 183 | ||| ||| | | | ||| ||| || || || | || | || | ||| Sbjct 3243317 GTGGCCAGCGGATGCCAAAAACA--AGAGCCTGTGTGGGACTCGCCC--TCCCACCTCAC 3243372 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG------CCGAAACGG- 236 | ||||| | |||||||||| |||||||||||||| ||| ||| | || Sbjct 3243373 TAGGTAAGTGAGGAAACGATAAGAATAGTGGTATTTCACCAGCGGCACCCCCGGGAGGGG 3243432 Query 237 --CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 |||||||||||||||||||||||| ||| |||||| | | ||||||||| || ||| Sbjct 3243433 GCCTCCCACTTATTCTACACCTCTCATGTC--TTCACAGTGCCAGACTAGAGTGAAACTC 3243490 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 |||||| || ||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 3243491 AACAGGTTCCTCTTTCCCCACTGATTCCGCCAAGCCCGTTCCCTTGGCTGTTGTTTCGCT 3243550 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||||||||| |||||||||||| || |||||| |||||||||| ||||||||||||| || Sbjct 3243551 AGATAGTAGGTAGGGACAGTGGAAACCTCGTTCATCCATTCATTCGCGTCACTAATTGGA 3243610 Query 415 TGACGAGGCATTTGGCTA 432 | |||||||||||||||| Sbjct 3243611 TAACGAGGCATTTGGCTA 3243628 Score = 313 bits (346), Expect = 8e-83 Identities = 344/449 (77%), Gaps = 27/449 (6%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||||||||||| |||| |||| | |||||| | ||| | ||| Sbjct 3287745 CTTGTGCTCCATGGGAGATTTCTGTCCTCCCTGAGCTCACCTTAGAATGCCTTCATTACC 3287804 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| | | || |||||| ||||||||||||||| || |||| |||||| | Sbjct 3287805 GTTTGACAGGTATACCACCCCAGTCAAACTCCCCACCTGCCACTGTC-----CCCGGAGC 3287859 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAA-ATGGTCG-GTGAAG-ACCAG---TTCCGCTT 180 || || | || |||||||| | | || ||| | || | | |||| | Sbjct 3287860 GGGTCGTGTCCAGCCGGT--GCCAGAAACAAGATCCTGTGTGGGACTCGCCCTCCCGCCT 3287917 Query 181 CA--TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC---TTGCGCC-----G 230 || ||| ||||| | ||||||||| ||||||||||||||| | ||||| | Sbjct 3287918 CACCTTG--TAAGTGAGGAAACGATAAAAGTAGTGGTATTTCACCCATGGCGCCCCCGGG 3287975 Query 231 AAACGG--CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTC 288 | || |||||||||||||||| ||||||| | | |||||| | | |||||||||| Sbjct 3287976 AGGGGGGCCTCCCACTTATTCTACGCCTCTCAGGACTCTTCACAGTGCCAGACTAGAGTC 3288035 Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 || |||||||| |||||||||| |||||||||||||||||| |||||||||||||||| Sbjct 3288036 AAACTCAACAGAGTCTTCTTTCAATGCTGATTCCGCCAAGCCCATTCCCTTGGCTGTGGT 3288095 Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 3288096 TTCACTAGATAGTAGGTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCACGTCACTT 3288155 Query 409 ATTAGATGACGAGGCATTTGGCTANCTTA 437 ||||||||| |||||||||| || ||| Sbjct 3288156 ATTAGATGATCAGGCATTTGGATATTTTA 3288184 Score = 311 bits (344), Expect = 3e-82 Identities = 335/440 (76%), Gaps = 30/440 (7%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | |||||| | |||||||||| Sbjct 3337391 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGAATACCTGCGTTACC 3337332 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| | || | | ||||||||| ||||||||||||||| || |||| ||||| Sbjct 3337331 ATTTGAGAGGTATACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCT-----CCGGAGT 3337277 Query 127 GGCCCGCGA--AGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG---TTCCGCTTC 181 || ||| | || | |||||||| | |||| | | || | || Sbjct 3337276 GGGCCGTGGCCAGCGGGT----GCCAGAAACAAG-------AGACTCGCCCTCCCACCTC 3337228 Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC---TTGCGCC-----GAAA 233 ||||| | |||||||||| ||||||||||||| | ||||| || Sbjct 3337227 GCCAGGTAAGTGAGGAAACGATAAGAATAGTGGTATTTCAGCAGTGGCGCCCCCGGGATG 3337168 Query 234 CGGC-TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 ||| ||| | |||||||||||||||| ||| |||||| | | |||||||||||||| Sbjct 3337167 GGGCCTCCTTCCTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGC 3337108 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 3337107 TCAACAGCGTCTTTTTTCCCCACTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTGG 3337048 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 3337047 CTAGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTA 3336988 Query 413 GATGACGAGGCATTTGGCTA 432 ||| || ||||||||||||| Sbjct 3336987 GATAACAAGGCATTTGGCTA 3336968 Score = 248 bits (274), Expect = 3e-63 Identities = 208/255 (82%), Gaps = 10/255 (4%) Strand=Plus/Minus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-------CCGAAACGGCTCC 240 ||||| | ||| |||||| ||| ||||||||||| ||| | | | || || Sbjct 3386225 TAAGTGAGGAAAAGATAAGAGTAATGGTATTTCACCGGCGGTGCCCCCAGGAGGGGGGCC 3386166 Query 241 CAC---TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||| |||||||||||||||| ||| |||||| | | ||||||||| ||||||||| Sbjct 3386165 CACCATTTATTCTACACCTCTCCTGTCTCTTCACAGTGCCAGACTAGAGTGAAGCTCAAC 3386106 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||| ||||||| |||||||| | ||||||||||||||||||||||||| |||||| Sbjct 3386105 AGGGTCTATTTTCCCCACTGATTCCACTAAGCCCGTTCCCTTGGCTGTGGTTTGGCTAGA 3386046 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| ||||| |||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct 3386045 TAGTAGGTAGGGGCAGTGGGAATCTCGTTCATCCATTCATGTGCGTCACTTATTAGATGA 3385986 Query 418 CGAGGCATTTGGCTA 432 | ||| |||||| || Sbjct 3385985 CTAGGTATTTGGTTA 3385971 Score = 145 bits (160), Expect = 2e-32 Identities = 88/93 (95%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 |||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| Sbjct 3231706 TAAGAGAGTCATAGTTACTCCCGCCGTTTAGCTGCGCTTCATTGAATTTCTTCACTTTGA 3231765 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 ||||||||||||| ||||||||||||||||||| Sbjct 3231766 CATTCAGAGCACTAGGCAGAAATCACATTGCGT 3231798 Score = 138 bits (152), Expect = 4e-30 Identities = 91/101 (90%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||||| Sbjct 3389654 TTAAGAGAGTCATAGTTACTCCCGCCGTTTAGCCGTGCTTCATTGAATTTATTCACTTTG 3389595 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||| ||| || || ||||| Sbjct 3389594 ACATTCAGAGCACTGGGCAGAAATTGCATCGCATCGACATC 3389554 Score = 138 bits (152), Expect = 4e-30 Identities = 84/89 (94%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct 3446540 TTAAGAGAGTCATAGTTACTCCCGCCGTTTAGCCGCGCTTCATTTAATTTCTTCACTTTG 3446599 Query 495 ACATTCAGAGCACTGGGCAGAAATCACAT 523 ||||||||||||||||||||||||| ||| Sbjct 3446600 ACATTCAGAGCACTGGGCAGAAATCGCAT 3446628 Score = 129 bits (142), Expect = 2e-27 Identities = 85/94 (90%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 ||||||||||||||||| || ||||||| | ||| |||||||| |||||||||||||| Sbjct 3453908 AGAGTCATAGTTACTCCACCCATTTACCCACACTTCATTGAATTTTTTCACTTTGACATT 3453967 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||| ||||||| Sbjct 3453968 CAGAGCACTGGGCAGAAATCACATTGTGTCAACA 3454001 Score = 123 bits (136), Expect = 8e-26 Identities = 82/91 (90%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502 |||||||||||| || ||||||||| || ||| ||||||||||||||| |||||||||| Sbjct 3255298 GTCATAGTTACTTCCACCGTTTACCTGCACTTCATTGAATTTCTTCACTATGACATTCAG 3255357 Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||| |||||||| Sbjct 3255358 AGCACTGGGCAGAAATCACATCACGTCAACA 3255388 Score = 114 bits (126), Expect = 4e-23 Identities = 82/95 (86%), Gaps = 6/95 (6%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTA------CCCGCGCTTGGTTGAATTTCTTC 488 |||||||||||||||||||||||||| |||| | | ||||| || ||||||||| Sbjct 3339967 TTAAGAGAGTCATAGTTACTCCCGCCATTTAGGGTTACTCCCGCTTCATTTAATTTCTTC 3339908 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 ||||||||||||||||||||||||||||||| ||| Sbjct 3339907 ACTTTGACATTCAGAGCACTGGGCAGAAATCGCAT 3339873 Score = 105 bits (116), Expect = 2e-20 Identities = 80/93 (86%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 ||||||||||||||||||||| || ||||| | |||||| ||||||||||||||||||| Sbjct 3414456 TAAGAGAGTCATAGTTACTCCTGCTGTTTAGCTGCGCTTCATTGAATTTCTTCACTTTGA 3414397 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 ||||||||||||| | || | ||||| |||| Sbjct 3414396 CATTCAGAGCACTAGACA-CGAGCACATCGCGT 3414365 Score = 102 bits (112), Expect = 3e-19 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 468 CGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3384722 CGCGTTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCA 3384663 Query 528 TCAACA 533 |||||| Sbjct 3384662 TCAACA 3384657 >seq98 Length=161239 Score = 264 bits (292), Expect = 4e-68 Identities = 323/438 (74%), Gaps = 22/438 (5%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| ||| | |||||| |||||| || Sbjct 8004 CTTGTGCTCCACGGGAGGTTTCTGTCCTCCCTGAACTCGTTTTAGGATACCTGCATTGCC 8063 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| ||| | || || Sbjct 8064 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCTTCTGTTCCCGGAGTGGGTC 8123 Query 127 --GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184 ||| ||| ||| ||| ||| || || | | || | |||| ||| Sbjct 8124 ATGGCTGGCGGGTGACAGAAACA--AGAGCCTGTGTGGGGCTGGCCC-TACCGCCTCACC 8180 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-------CCGAAACGG- 236 ||||||| ||| |||||| ||||||||||||||| ||| | | | || Sbjct 8181 AGGTAAGTAAGGAAAAGATAAGAGTAGTGGTATTTCACCAGCGGTACCCCCAGGAGGGGG 8240 Query 237 --CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 |||||| ||||||||||||||||| ||| | ||| | | ||||||||| || Sbjct 8241 GCCTCCCATTTATTCTACACCTCTCATGTCTCTCTACAGTGCCAGACTAGAGTGAA---- 8296 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 |||||| | ||||||| ||||||||||| ||| ||||||||||||||||||||||| Sbjct 8297 ---AGGGTCCTTTTTCCCCTTTGATTCCGCCATGCCTGTTCCCTTGGCTGTGGTTTCGCT 8353 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||||||||| |||||||||||||||||| || ||||||||||||| ||||||||||||| Sbjct 8354 AGATAGTAGGTAGGGACAGTGGGAATCTTATTCATCCATTCATGCGTGTCACTAATTAGA 8413 Query 415 TGACGAGGCATTTGGCTA 432 |||||||||||||||||| Sbjct 8414 TGACGAGGCATTTGGCTA 8431 Score = 138 bits (152), Expect = 4e-30 Identities = 87/94 (93%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 |||||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||| Sbjct 47208 AGAGTCATAGTTACTCCCACCATTTACCCACGCTTCATTGAATTTTTTCACTTTGACATT 47149 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||| ||||||| Sbjct 47148 CAGAGCACTGGGCAGAAATCACATTGTGTCAACA 47115 Score = 111 bits (122), Expect = 5e-22 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||| | ||||||| |||||||| || ||||| ||||||||||||||||| Sbjct 113951 TTAAGAGAGTCAAATTTACTCCTGCCGTTTAGCCACGCTTCATTGAATTTCTTCACTTTA 113892 Query 495 ACATTCAGAGCACTGGGCAGAAATCACAT 523 |||||| | |||||||||||||||| ||| Sbjct 113891 ACATTCTGTGCACTGGGCAGAAATCGCAT 113863 Score = 102 bits (112), Expect = 3e-19 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 468 CGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9760 CGCGTTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCA 9819 Query 528 TCAACA 533 |||||| Sbjct 9820 TCAACA 9825 Score = 95.1 bits (104), Expect = 4e-17 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2006 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 2057 >seq3 Length=56798892 Score = 237 bits (262), Expect = 5e-60 Identities = 300/431 (70%), Gaps = 85/431 (20%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| ||||||| |||| |||| || ||||| | |||||| |||| Sbjct 24541712 CTTGTGCTCCACAGGAGGTTTCTGTCCTCCTTGAGCCCACCTTAAGGCACCTGTGTTACC 24541771 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||| ||||| ||||||||||||||| || |||| |||||| Sbjct 24541772 GTTTGACAGGTGTACCGTCCCAGTCAAACTCCCCACCTGCCACTGTC-----CCCGGAGT 24541826 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || |||| ||| | Sbjct 24541827 GGGTCGCG------------------------------------------GCT-----GG 24541839 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC---GCCGAAACGG--CTCCC 241 ||||| | |||| ||| | ||| ||||||||||| ||| ||| | || ||||| Sbjct 24541840 GTAAGTGAGGAAACAATACGAGTAATGGTATTTCACCTGCAGCGCCCCCAGGGGCCTCCC 24541899 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 ||||||||||||||||||| ||| ||||||||| Sbjct 24541900 ACTTATTCTACACCTCTCATGTC----------------------------TCAACAGGG 24541931 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||| |||||||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct 24541932 TCTCCTTTCCCCGCTGATTCCGCCAACCCTGTTCCCTTGGCTGTGGTTTCACTAGATAGT 24541991 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct 24541992 AGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGTGTCACTAATTAGATGACAAG 24542051 Query 422 GCATTTGGCTA 432 ||||||||||| Sbjct 24542052 GCATTTGGCTA 24542062 Score = 149 bits (164), Expect = 2e-33 Identities = 93/100 (93%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||| || ||||||||| |||||| |||| |||||||||||| Sbjct 24545883 CTTAAGAGAGTCATAGTTACTTCCACCGTTTACCTGCGCTTCATTGAGTTTCTTCACTTT 24545942 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||| ||||||||| Sbjct 24545943 GACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 24545982 >seq9 Length=53241385 Score = 91.5 bits (100), Expect = 5e-16 Identities = 81/100 (81%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 14 TCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAAC 73 || || |||| ||||||| |||| |||| | ||||||||||||||||||| |||| || Sbjct 19940446 TCCACGGGAGCTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACCGTTTGAC 19940505 Query 74 AGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 || ||| | ||||| | ||||||||||| ||| || |||| Sbjct 19940506 AGGTGTACTGCCCC-GTCAAACTCCCCATCTGCCACTGTC 19940544 >seq25 Length=14387843 Score = 87.8 bits (96), Expect = 6e-15 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 38 TGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 |||| | ||||||||||||||||||| |||| |||| ||| ||||||||| ||||||| Sbjct 14020945 TGAGCTCGCCTTAGGACACCTGCGTTACCGTTTGACAGGTGTACCGCCCCAGTCAAACTC 14020886 Query 98 CCCACCTGACAATGTC 113 |||||||| || |||| Sbjct 14020885 CCCACCTGCCACTGTC 14020870 >seq4 Length=73198282 Score = 86.0 bits (94), Expect = 2e-14 Identities = 102/137 (74%), Gaps = 10/137 (7%) Strand=Plus/Plus Query 208 GTAGTGGTATTTCACTTGCGCCGAAACGG--------CTCCCACTTATTCTACACCTCTC 259 ||||||||||||| || || ||| || ||||| || |||| ||||| || Sbjct 45560906 GTAGTGGTATTTCTCTGGCAGCGACCAGGGAGGGGGCCTCCCTCTGATTCCACACCCTTC 45560965 Query 260 AAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT 319 ||| |||||| | | |||||||||||||||||||||||||| |||||||| ||||| Sbjct 45560966 T-GTCTCTTCACAGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTACTTTCCCCACTGAT 45561024 Query 320 TC-CGCCAAGCCCGTTC 335 || | |||| ||||| Sbjct 45561025 TCTGGTGAAGCTCGTTC 45561041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635168506048