Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq4883 118 5e-25 seq4887 77.0 1e-12 >seq4883 Length=37168685 Score = 118 bits (130), Expect = 5e-25 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||| ||||||| ||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct 35199851 GGAAAAGTAACTAACAAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCG 35199910 Query 61 CCGAATCCCCG-CCCCGC-GGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| |||| | | |||||| ||| ||||||||| Sbjct 35199911 CCGAATCCCCGTCCCCTCAGCCGGGGCGAGGGCATTGTGGCGTA 35199954 >seq4887 Length=33568646 Score = 77.0 bits (84), Expect = 1e-12 Identities = 56/66 (85%), Gaps = 7/66 (11%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||| ||||| || ||||||||||||| Sbjct 12789770 GGAAAAGAAACTAACAAGGATTCCCTCAGTAGCGGCG-------AGCGAAGAGCCCAGCG 12789718 Query 61 CCGAAT 66 |||||| Sbjct 12789717 CCGAAT 12789712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230389441920