Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4876 219 1e-54 seq4886 212 2e-52 seq4887 196 2e-47 seq4885 170 6e-40 seq4867 154 5e-35 seq171 145 2e-32 seq4875 138 4e-30 seq4872 136 1e-29 seq4874 134 5e-29 seq4868 125 2e-26 seq4865 125 2e-26 seq4883 123 8e-26 seq4870 122 3e-25 seq76 122 3e-25 seq85 120 1e-24 seq4869 114 4e-23 seq755 114 4e-23 seq1013 107 6e-21 seq380 100 9e-19 seq4884 77.0 1e-11 >seq4876 Length=16505880 Score = 219 bits (242), Expect = 1e-54 Identities = 203/254 (80%), Gaps = 5/254 (2%) Strand=Plus/Plus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC---GGCTCCCACT 244 ||||| | ||||||||| ||||||||||||| | || | || || | Sbjct 5280940 TAAGTGAGGAAACGATAAAAGTAGTGGTATTTCCCCAGCAGTGGAATTGTGGGAGTGTAT 5280999 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 |||||||| || |||| || |||||| | | ||||| |||||||||||||||| ||| Sbjct 5281000 TATTCTACCCC-CTCAT-TCTCTTCACAGTGCCAGACTAAAGTCAAGCTCAACAGGTTCT 5281057 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 |||||||| |||||||| || |||| |||||||||||||||||||||||||||||| || Sbjct 5281058 TCTTTCCCTGCTGATTCTGCTAAGCTCGTTCCCTTGGCTGTGGTTTCGCTAGATAGCAGG 5281117 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 || ||||||||||||||| ||| |||||| |||| | || ||||| || |||||||||| Sbjct 5281118 TAAGGACAGTGGGAATCTTGTTCATCCATGCATGTACATCGCTAATAAGGTGACGAGGCA 5281177 Query 425 TTTGGCTACCTTAA 438 |||||||||||||| Sbjct 5281178 TTTGGCTACCTTAA 5281191 >seq4886 Length=30003503 Score = 212 bits (234), Expect = 2e-52 Identities = 153/177 (86%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 |||||||||||||| |||| ||| |||||| | | |||||||||||||| ||||| || Sbjct 16216104 ACTTATTCTACACCCCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCCCAACAAGG 16216045 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||| | |||||| ||||||||| ||||| |||||||| |||| |||||||| Sbjct 16216044 TCTTCTTTCCCTGTTGATTCTGCCAAGCCCATTCCCATGGCTGTGTTTTCACTAGATAGC 16215985 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 || | | ||||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct 16215984 AGGTGGAGACAGTGGGAATCACATTCATCCATTCATGCGCGTCACTAATTAGATGAC 16215928 >seq4887 Length=33568646 Score = 196 bits (216), Expect = 2e-47 Identities = 113/116 (97%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 25977412 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCAT 25977471 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 25977472 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 25977527 >seq4885 Length=26102777 Score = 170 bits (188), Expect = 6e-40 Identities = 115/129 (89%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| | | ||||||| ||||||||| |||||||| |||||||| ||||||| |||| Sbjct 22315052 TTCACAGTGCCAGACTAGAATCAAGCTCAGCAGGGTCTACTTTCCCCACTGATTCTGCCA 22315111 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| || Sbjct 22315112 AGCCCGTTCTCTTGGCTGTGGTTTCGCTAGATAGCAGGTAGGGACAGTGGGAATCTCATT 22315171 Query 387 AATCCATTC 395 |||||||| Sbjct 22315172 CATCCATTC 22315180 >seq4867 Length=22528368 Score = 154 bits (170), Expect = 5e-35 Identities = 93/98 (95%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 ||||||||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||| Sbjct 6710514 TAAGAGAGTCATAGTTACTCCTGCCGTTTACGCGCGCTTCATTGAATTTCTTAACTTTGA 6710455 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||| Sbjct 6710454 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 6710417 >seq171 Length=1225630 Score = 145 bits (160), Expect = 2e-32 Identities = 95/105 (90%), Gaps = 6/105 (6%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTA------CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 |||||||||||||||||| |||| ||||||||||||||||| |||||||||||| Sbjct 685345 TTAAGAGAGTCATAGTTAACGTTACTCCTGCCGTTTACCCGCGCTTCATTGAATTTCTTC 685404 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 685405 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 685449 >seq4875 Length=22346808 Score = 138 bits (152), Expect = 4e-30 Identities = 89/96 (93%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC-TTTGACA 497 |||||||| ||||||||| ||||||||| ||||||| |||||||||||||| ||||||| Sbjct 8792838 GAGAGTCAAAGTTACTCCTGCCGTTTACACGCGCTTCATTGAATTTCTTCACTTTTGACA 8792897 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||| ||| Sbjct 8792898 TTCAGAGCACTGGGCAGAAATCACATTGCGTCGACA 8792933 >seq4872 Length=27116566 Score = 136 bits (150), Expect = 1e-29 Identities = 108/129 (84%), Gaps = 7/129 (5%) Strand=Plus/Minus Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 || |||||||| |||| ||| |||||| |||||||||||||||| ||||||||| Sbjct 21648690 TAATCTACACCCCTCATGTCTCTTCACA------GACTAGAGTCAAGCTCTACAGGGTCT 21648637 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 |||||||| || ||||| |||||| |||| |||||||||||||||||| ||||||| | Sbjct 21648636 TCTTTCCCAGCAGATTCTGCCAAG-CCGTCCCCTTGGCTGTGGTTTCGGTAGATAGCATG 21648578 Query 365 TAGGGACAG 373 ||||||||| Sbjct 21648577 TAGGGACAG 21648569 Score = 132 bits (146), Expect = 2e-28 Identities = 120/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 || |||| | | ||| ||| |||||| | | ||||| ||||||||||| |||| ||| Sbjct 21648560 TAATCTAAAGCCGTCATGTCTCTTCACAGTGCCAGACTACAGTCAAGCTCAGCAGGATCT 21648501 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 ||||| ||||||||||| |||||| ||| |||||| |||||||| | |||||| || Sbjct 21648500 TCTTTTCCCGCTGATTCTGCCAAGTTTGTTTTCTTGGCCGTGGTTTCACCAGATAGCAGG 21648441 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTC 395 |||||||||| |||||||| || ||||||| Sbjct 21648440 TAGGGACAGTTGGAATCTCATTCGTCCATTC 21648410 Score = 96.9 bits (106), Expect = 1e-17 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||| | ||||| ||||||||||||||||||||| ||||||||||||||| |||||| Sbjct 15299735 GTTTATGCACGCTTCATTGAATTTCTTCACTTTGACAATCAGAGCACTGGGCATAAATCA 15299676 Query 521 CATTGCGTCAACA 533 ||| ||||||||| Sbjct 15299675 CATCGCGTCAACA 15299663 >seq4874 Length=21776898 Score = 134 bits (148), Expect = 5e-29 Identities = 87/94 (93%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC-TTTGACATT 499 |||||||||||||||| | ||||||| ||||||| |||||||||||||| ||||||||| Sbjct 17648920 GAGTCATAGTTACTCCTGGCGTTTACACGCGCTTCATTGAATTTCTTCACTTTTGACATT 17648979 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||| ||| Sbjct 17648980 CAGAGCACTGGGCAGAAATCACATTGCGTCGACA 17649013 >seq4868 Length=23726471 Score = 125 bits (138), Expect = 2e-26 Identities = 86/96 (90%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT-GACA 497 |||| ||| |||||||| || |||||| ||||||| ||||||||||||||||| |||| Sbjct 9295170 GAGAATCAGTGTTACTCCTGCTGTTTACACGCGCTTCATTGAATTTCTTCACTTTTGACA 9295111 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||| ||| Sbjct 9295110 TTCAGAGCACTGGGCAGAAATCACATTGCGTCGACA 9295075 >seq4865 Length=21959719 Score = 125 bits (138), Expect = 2e-26 Identities = 80/86 (93%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 ||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 21727717 AGTTACTCCTGCCGTTTACCCGCGCATCATTGAATTTCTTCACTTTGACATTCAGAGCAC 21727658 Query 508 TGGGCAGAAATCACATTGCGTCAACA 533 | |||||||||||||| ||||||||| Sbjct 21727657 T-GGCAGAAATCACATCGCGTCAACA 21727633 >seq4883 Length=37168685 Score = 123 bits (136), Expect = 8e-26 Identities = 85/96 (89%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 || |||||||| ||||||||||| ||||||||||||| ||||||||||| ||||||||| Sbjct 15036749 AGGGAGTCATATTTACTCCCGCCATTTACCCGCGCTTCATTGAATTTCTTGACTTTGACA 15036808 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||| ||| |||||||||||||||| || |||||| Sbjct 15036809 TTCATAGCCCTGGGCAGAAATCACACCGCATCAACA 15036844 >seq4870 Length=28600511 Score = 122 bits (134), Expect = 3e-25 Identities = 89/103 (86%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG---CTTGGTTGAATTTCTTCAC 490 |||||||||||||||||||||| ||||||||| | | ||| ||||||||||||| Sbjct 25010097 CTTAAGAGAGTCATAGTTACTCGTGCCGTTTACACACTGAACTTCACTGAATTTCTTCAC 25010156 Query 491 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||| ||||||||||||||||||| || |||||| Sbjct 25010157 TTTGACATTCAGAACACTGGGCAGAAATCACATCGCATCAACA 25010199 >seq76 Length=306171 Score = 122 bits (134), Expect = 3e-25 Identities = 82/92 (89%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||| ||||| |||||| || ||| |||||||||||||||||| Sbjct 7560 TTAAGAGAGTCATAGTTATACCCGCTGTTTACATGCACTTTATTGAATTTCTTCACTTTG 7619 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGC 526 ||||||| ||||||||||||||||||||| || Sbjct 7620 ACATTCACAGCACTGGGCAGAAATCACATCGC 7651 >seq85 Length=317276 Score = 120 bits (132), Expect = 1e-24 Identities = 83/94 (88%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 ||||| ||||||| |||| || ||||| | ||||| ||||||| ||||||||||| ||| Sbjct 198733 AGAGTAATAGTTAGTCCCACCTTTTACACACGCTTCATTGAATTACTTCACTTTGAGATT 198792 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||| ||||||||| Sbjct 198793 CAGAGCACTGGGCAGAAATCACATCGCGTCAACA 198826 >seq4869 Length=19992947 Score = 114 bits (126), Expect = 4e-23 Identities = 81/90 (90%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 |||||||||||||||||| | ||||||| ||||||| ||| |||| ||||||||| ||| Sbjct 18083083 GAGAGTCATAGTTACTCCTGACGTTTACACGCGCTTCATTGCATTTATTCACTTTG-CAT 18083025 Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGT 528 |||||||||||||||| ||||||||||||| Sbjct 18083024 TCAGAGCACTGGGCAG-AATCACATTGCGT 18082996 >seq755 Length=203271 Score = 114 bits (126), Expect = 4e-23 Identities = 68/71 (96%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 152930 AGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACTAG 152989 Query 422 GCATTTGGCTA 432 ||||||||||| Sbjct 152990 GCATTTGGCTA 153000 >seq1013 Length=362995 Score = 107 bits (118), Expect = 6e-21 Identities = 83/99 (84%), Gaps = 6/99 (6%) Strand=Plus/Minus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT------GAATTTCTTCACTTTG 494 |||||||||||||||| |||||||||| | ||| | |||||||||||||||| Sbjct 311319 GAGTCATAGTTACTCCTGCCGTTTACCTACACTTCACTTGAAATGAATTTCTTCACTTTG 311260 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||| ||||||| || |||||| Sbjct 311259 ACATTCAGAGCACTGGGCAGAGATCACATCGCATCAACA 311221 Score = 107 bits (118), Expect = 6e-21 Identities = 83/99 (84%), Gaps = 6/99 (6%) Strand=Plus/Minus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT------GAATTTCTTCACTTTG 494 |||||||||||||||| |||||||||| | ||| | |||||||||||||||| Sbjct 315244 GAGTCATAGTTACTCCTGCCGTTTACCTACACTTCACTTGAAATGAATTTCTTCACTTTG 315185 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||| ||||||| || |||||| Sbjct 315184 ACATTCAGAGCACTGGGCAGAGATCACATCGCATCAACA 315146 >seq380 Length=116021 Score = 100 bits (110), Expect = 9e-19 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||| |||| || |||||||||| |||||||||||||||||||||||||||||| Sbjct 43216 GTTTACCCGAGCTTCATTTAATTTCTTCATTTTGACATTCAGAGCACTGGGCAGAAATCA 43275 Query 521 CATTGCGTCAACA 533 ||| |||||||| Sbjct 43276 CATCACGTCAACA 43288 >seq4884 Length=26945264 Score = 77.0 bits (84), Expect = 1e-11 Identities = 44/45 (98%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 19250751 ACTATGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 19250795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635120071424