Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4869 122 7e-23 >seq4869 Length=19992947 Score = 122 bits (134), Expect = 7e-23 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 66033 CTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGG 66092 ||| ||| || || ||| ||||| || || || |||||||| |||||| | |||| Sbjct 3228312 CTACCTCATCGTGACTGGTGTACTCTACTATCTCTGTGCACAGGTTACTGGATTTGATGG 3228371 Query 66093 TGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAG 66152 |||||| ||||| || || |||||||| ||||| || |||||||| | |||||| || | Sbjct 3228372 TGCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTAAAGCATGTAGGGTG 3228431 Query 66153 TGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189 |||| ||||| || |||||||||||||| ||||| Sbjct 3228432 TGCCAGTCTCTGTCTGAGACTCAATGATGGCATGCCA 3228468 Score = 82.4 bits (90), Expect = 6e-11 Identities = 98/132 (74%), Gaps = 6/132 (5%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| |||||||||||||| || ||||| | |||| || ||||| | Sbjct 3229214 CATGAACAGATCAGGAATCCAGAGGGCGTAAAACAGATCTCTAGCTCTCTGTTCCTCTTT 3229273 Query 66400 GCC---GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAG 66456 || | |||||| || || ||||| ||||| ||||| |||||| || ||||| Sbjct 3229274 TCCAGTATTCTTTTTGAGC---TCTAGGAAGTCAAAAATGTCAAAATGCCAGGGCTCCAG 3229330 Query 66457 GTAGATGGCGAA 66468 ||| ||||| || Sbjct 3229331 GTACATGGCAAA 3229342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397544315880320