Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3000 295 1e-77 seq1034 224 2e-56 seq1778 208 1e-51 seq3122 201 2e-49 seq791 132 8e-29 seq1012 123 4e-26 seq181 116 6e-24 seq2443 105 1e-20 seq2911 100 5e-19 seq2664 96.9 6e-18 seq3033 84.2 4e-14 seq2922 82.4 1e-13 seq303 82.4 1e-13 seq192 80.6 5e-13 seq3311 77.0 6e-12 seq2850 77.0 6e-12 seq1822 75.2 2e-11 >seq3000 Length=6698243 Score = 295 bits (326), Expect = 1e-77 Identities = 226/265 (85%), Gaps = 7/265 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||| ||||||||| | | |||||||||||||||||| |||||| Sbjct 3358372 TCATCAGTAGGGTAAAATGAACCTGTCTAA---CAGTCTAAACCCAGCTCACGCTCCCTA 3358316 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 3358315 TTAGTGGGTGAACAATCCAACGCTT---GAATTCTGCTTCACAATGATAGGAAGAGCCGA 3358259 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 3358258 CATCGAAGGATCAAAAAGTGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 3358199 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||| ||||||||||| ||||| ||| | ||| | | | | ||||||||| ||| Sbjct 3358198 CTGTGATAACTTTTCTGAAACCTCCAGCTTAAAACCCCCAAAGTCAAAAGGATCGTGAGG 3358139 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 || | |||||| || || |||||| Sbjct 3358138 CCCCGCTTTCA-CGTCTGCATTCAC 3358115 >seq1034 Length=3516007 Score = 224 bits (248), Expect = 2e-56 Identities = 175/214 (82%), Gaps = 20/214 (9%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 2805412 TCATCAGTAGGGTAAAACTAACCCGTCTCACAACGGTCTAAACCCAGCTCACGTTCCCTA 2805353 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||| ||| |||||||||||| Sbjct 2805352 TTAGTGGGTGAACAATCCAACGCT--------------------TGACAGGAAGAGCCGA 2805313 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| ||||||||||||||| |||| ||||||||| ||||| ||||||||||||||| || Sbjct 2805312 CATGGAAGGATCAAAAAGCGACGTTGCTATGAACTTTTGGCCGCCACAAGCCAGTTACCC 2805253 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 |||||| ||||||| |||||| ||| | ||| Sbjct 2805252 CTGTGGCAACTTTTTAAACACCTCCAGCTTAAAA 2805219 >seq1778 Length=1752511 Score = 208 bits (230), Expect = 1e-51 Identities = 203/264 (77%), Gaps = 23/264 (9%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| |||||||| |||||||||||||||| || |||||||||||||||||||||||||| Sbjct 279256 TCATAAGTAGGGTTAAACTAACCTGTCTCACGATGGTCTAAACCCAGCTCACGTTCCCTA 279315 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||| ||||||||| || | || ||| | Sbjct 279316 TTAGTGGGTGAA-------------------TTCTGCTTCACAATTTTGTGA---GCCAA 279353 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| Sbjct 279354 CATCAAAGGATCAAAAAGCGGCGTCGCTATGAACACTTGGCCGCCACAAGCCAGTTATCC 279413 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | || | || |||| ||| Sbjct 279414 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTAT-GAGAATCGGGAGG 279472 Query 271 CCACACTTTCATGGTTTGTATTCA 294 || | |||||| ||| |||||||| Sbjct 279473 CCCCGCTTTCACGGTCTGTATTCA 279496 >seq3122 Length=4519562 Score = 201 bits (222), Expect = 2e-49 Identities = 184/232 (79%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41 GGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTG 100 |||||||||||||||| ||||||| ||| ||||||||| | |||| |||||| | | Sbjct 525210 GGTAAAACTAACCTGTGTCATGAC----TAATCCCAGCTCATGCACCCTGTTAGTGAGCG 525265 Query 101 AACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGA 160 ||||||||||||||| |||||||||||| |||| | |||||||||||||||||| Sbjct 525266 AACAATCCAACGCTTGTTGAATTCTGCTTCACAATGACGGAAAGAGCCGACATCGAAGGG 525325 Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220 ||||||||| || | | |||||||| | |||||||||| ||||||||||||||||| Sbjct 525326 TCAAAAAGCGAC----CAAAGAACGCTTTCCCGCCACAAGCCTGTTATCCCTGTGGTAAC 525381 Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||| | |||| || | ||| | || | | |||||||| |||||| Sbjct 525382 TTTTCTGACTCCTCCTGCTTAAAACCACAAGAGTCAGAAGGATCGTTAGGCC 525433 >seq791 Length=3046141 Score = 132 bits (146), Expect = 8e-29 Identities = 99/116 (85%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 65 GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTC 124 ||||||| |||||||||||||||||||| || ||||||| |||||||||| |||||| Sbjct 2397993 GGTCTAATCCCAGCTCACGTTCCCTATTGGTACGTGAACAGTCCAACGCTTGGTGAATTC 2397934 Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| || |||||||||||||| |||||||||||||| |||||| |||||||| Sbjct 2397933 TGCGTCACAATGATAGGAAGAGCTTACATCGAAGGATCACAAAGCAGTGTCGCTAT 2397878 >seq1012 Length=2313096 Score = 123 bits (136), Expect = 4e-26 Identities = 87/100 (87%), Gaps = 7/100 (7%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||| |||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 381218 TCATCAGCAGGGTAAAACTAACCTGTCTCA-------CTAAACCCAGCTCATGTTCCCTA 381270 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||||||||||||||||||| ||||| |||||||||||| Sbjct 381271 TTAGTGGGTGAACAATCCAGCGCTTGGTGAATTCTGCTTC 381310 >seq181 Length=4131583 Score = 116 bits (128), Expect = 6e-24 Identities = 84/96 (88%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 459774 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 459715 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 | |||||||||||||||||||||||||||||||||| Sbjct 459714 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 459679 >seq2443 Length=9576630 Score = 105 bits (116), Expect = 1e-20 Identities = 66/71 (93%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 8544347 GAATTCTTCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTTGCT 8544406 Query 179 ATGAACGCTTG 189 ||||||||||| Sbjct 8544407 ATGAACGCTTG 8544417 >seq2911 Length=7281675 Score = 100 bits (110), Expect = 5e-19 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 || |||| |||||||||| |||||||| || ||| |||| | |||||||||||| || Sbjct 506137 TCGTCAGCAGGGTAAAACAAACCTGTCCCACGACAGTCTGATCCCAGCTCACGTACCTCC 506196 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||| | |||||||||||||||||| |||||||||||| Sbjct 506197 TTATTAAGTGAACAATCCAACGCTTGATGAATTCTGCTTC 506236 Score = 89.7 bits (98), Expect = 9e-16 Identities = 126/177 (71%), Gaps = 10/177 (6%) Strand=Plus/Minus Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||| |||| | |||||||| | | |||| |||| ||||| ||| Sbjct 4707542 CGAATTCTACTTCAGAGTGATAGGAGCA-CTGACACTCAAGGTAAAAAAAAAAAC----- 4707489 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 ||||||||||||||| |||||||||||||||||||||| ||||||| || ||| | Sbjct 4707488 ----AACGCTTGGCTGCCAGAAGCCAGTTATCCCTGTGGTAAGTTTTCTGACATCTCCTG 4707433 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | ||| | | | |||||| | ||||| |||||||||| |||| ||| Sbjct 4707432 CTTTAAACCCAAAAAGTCAGAAGGATTGCGAGGCCCTTCTTTCATGGTCTGTAGTCA 4707376 >seq2664 Length=10829054 Score = 96.9 bits (106), Expect = 6e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 55 GTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCT 114 |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 5836190 GTCTCACGATGGTCTAAACCCAGCTCACGTTTCCTATTAGTGGGTGAACAATCCAACGCT 5836131 Query 115 T 115 | Sbjct 5836130 T 5836130 >seq3033 Length=6768404 Score = 84.2 bits (92), Expect = 4e-14 Identities = 69/84 (82%), Gaps = 4/84 (5%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAG----CTCACGTTCC 87 ||||| ||| |||||||||| | |||| ||| |||||||||||| |||| ||||| Sbjct 3779921 CATCACTAGAGTAAAACTAATGGGCCTCAGGACTGTCTAAACCCAGGTCACTCATGTTCC 3779980 Query 88 CTATTAGTGGGTGAACAATCCAAC 111 || ||||||||||||||||| ||| Sbjct 3779981 CTTTTAGTGGGTGAACAATCTAAC 3780004 >seq2922 Length=6884920 Score = 82.4 bits (90), Expect = 1e-13 Identities = 92/126 (73%), Gaps = 14/126 (11%) Strand=Plus/Plus Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159 ||||||| ||| |||| |||||||||||| |||| |||||| | Sbjct 2927173 GAACAATTCAATGCTTGGTGAATTCTGCTTCACAATGAGAGGAAG--------------G 2927218 Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 |||||||||||| || | ||||| || | | ||||||||||||||| |||||||||| Sbjct 2927219 ATCAAAAAGCAAAATCACAATGAATGCGCGTCCACCACAAGCCAGTTATGCCTGTGGTAA 2927278 Query 220 CTTTTC 225 |||||| Sbjct 2927279 CTTTTC 2927284 >seq303 Length=4018286 Score = 82.4 bits (90), Expect = 1e-13 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 |||||||||||||||||||||| |||| ||| ||| ||||||||||| | |||| ||| Sbjct 623905 AGGGTAAAACTAACCTGTCTCACAACGGATTAACCCC-GCTCACGTTCCTTGTTAGAGGG 623847 Query 99 TGAACAATCCAA 110 | |||||||||| Sbjct 623846 TTAACAATCCAA 623835 >seq192 Length=3411382 Score = 80.6 bits (88), Expect = 5e-13 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 171 ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCA 230 || || |||||||| ||||||||||||| |||||||||| |||||||||| |||||| | Sbjct 2015692 ACATCACTATGAACTCTTGGCTGCCACAGGCCAGTTATCACTGTGGTAACATTTCTGACG 2015633 Query 231 CCTC 234 |||| Sbjct 2015632 CCTC 2015629 >seq3311 Length=562449 Score = 77.0 bits (84), Expect = 6e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87 || |||| |||||||||||||||||||||| ||| | |||| ||||||||||||||| Sbjct 263143 TCTTCAGCAGGGTAAAACTAACCTGTCTCACGACAGCCTAACCCCAGCTCACGTTCC 263199 >seq2850 Length=589550 Score = 77.0 bits (84), Expect = 6e-12 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||| ||||||||||||||| ||||| | ||| ||||||||| |||| ||||||| Sbjct 169073 TCATCAGTGGGGTAAAACTAACCTTTCTCACAATGGTTTAAACCCAGGTCACATTCCCTA 169014 Query 91 TT 92 || Sbjct 169013 TT 169012 >seq1822 Length=1264002 Score = 75.2 bits (82), Expect = 2e-11 Identities = 71/88 (81%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||| | |||| | || | ||||||| |||||||||||||||| ||| Sbjct 421283 TACTGAGCAGAATTCCTATTGCAACAACAGATCATCAGCAGGGTAAAACTAACCTCTCTT 421342 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCC 87 ||| |||||||| ||||||||| |||| Sbjct 421343 ATGGAGGTCTAAATCCAGCTCAC-TTCC 421369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854369626080