Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2944 333 9e-89 seq3188 279 2e-72 seq2915 165 3e-38 seq2859 165 3e-38 seq857 158 4e-36 seq3079 147 7e-33 seq2708 143 9e-32 seq3044 140 1e-30 seq3478 98.7 3e-18 seq2911 98.7 3e-18 seq1822 91.5 5e-16 seq3000 89.7 2e-15 seq2934 84.2 7e-14 seq1778 77.0 1e-11 >seq2944 Length=6283502 Score = 333 bits (368), Expect = 9e-89 Identities = 288/354 (81%), Gaps = 15/354 (4%) Strand=Plus/Minus Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC--GA---AACGGCT--C 239 |||||| ||||| ||||| ||||||||||||| | | | || | | || | Sbjct 81450 TTAAGTGAAAAATGGATAAC---AGTGGTATTTCACCAGTGGCTGGAGCCACCCCCTTCC 81394 Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 ||||||||||||||||||||| ||| ||||||| | | |||||| |||| | ||| || Sbjct 81393 CCACTTATTCTACACCTCTCATGTCTTTTCACAGTGCCAAACTAGAATCAAACCCAATAG 81334 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||||||| ||||||| || |||||| ||||||||||||||||||| | ||| | Sbjct 81333 GGTCTTCTTTCCCCACTGATTCTGCAAAGCCCATTCCCTTGGCTGTGGTTTCTCAAGACA 81274 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 | || |||||||||||| |||||| || |||||||||||| |||||||| | |||||| Sbjct 81273 GCAGCTAGGGACAGTGGAAATCTCATTCATCCATTCATGCATGTCACTAAGTTGATGACT 81214 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 || |||||||||||||||| ||||||||||||||||| || ||||| || |||| Sbjct 81213 AGACATTTGGCTACCTTAACAGAGTCATAGTTACTCCTGCTGTTTATCCAAGCTT----- 81159 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| || ||||||| |||||||||||||||||||||| |||||| Sbjct 81158 CATTTCTTCACTTCGATATTCAGAACACTGGGCAGAAATCACATTGCATCAACA 81105 >seq3188 Length=4951351 Score = 279 bits (308), Expect = 2e-72 Identities = 171/182 (94%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 180225 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTTCCT 180166 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||||| |||||||||||||||| || |||||| ||||||||||||||| ||||||||||| Sbjct 180165 TGGCTCTGGTTTCGCTAGATAGCAGCTAGGGATAGTGGGAATCTCGTTCATCCATTCATG 180106 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 || ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 180105 CGTGTCTCTAATTAGATGATGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 180046 Query 459 CC 460 || Sbjct 180045 CC 180044 >seq2915 Length=365020 Score = 165 bits (182), Expect = 3e-38 Identities = 96/99 (97%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 25876 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTG 25935 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||| ||||||||| Sbjct 25936 ACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 25974 >seq2859 Length=788048 Score = 165 bits (182), Expect = 3e-38 Identities = 96/99 (97%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 751895 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTG 751836 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||| ||||||||| Sbjct 751835 ACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 751797 >seq857 Length=2904665 Score = 158 bits (174), Expect = 4e-36 Identities = 95/100 (95%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 706186 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCATGCTTCATTGAATTTCTTCACTTT 706245 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||| ||||||||| Sbjct 706246 GACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 706285 >seq3079 Length=167907 Score = 147 bits (162), Expect = 7e-33 Identities = 86/89 (97%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 350 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 ||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1 TCGCTAGATAGCAGCTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAA 60 Query 410 TTAGATGACGAGGCATTTGGCTACCTTAA 438 ||||||||||||||||||||||||||||| Sbjct 61 TTAGATGACGAGGCATTTGGCTACCTTAA 89 >seq2708 Length=818106 Score = 143 bits (158), Expect = 9e-32 Identities = 112/133 (84%), Gaps = 8/133 (6%) Strand=Plus/Minus Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 |||||| ||||||||| | ||||||||||| ||||| ||||||||||| |||||| Sbjct 800256 TCACTAGTTAGATGACAAAGCATTTGGCTAT----AGAGAATCATAGTTACTATCGCCGT 800201 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 |||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 800200 TTACCCGCACTTCATTGAATTTCTTCACTTTGA----CAGAGCACTGGGCAGAATTCACA 800145 Query 523 TTGCGTCAACATC 535 ||| | ||||||| Sbjct 800144 TTGTGCCAACATC 800132 >seq3044 Length=4913229 Score = 140 bits (154), Expect = 1e-30 Identities = 91/99 (92%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||| || || ||| ||||||||||||||||| Sbjct 2321151 TTAAGAGAGTCATAGTTACTCCCGCCGTTGACT-GCACTTCATTGAATTTCTTCACTTTA 2321093 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| |||||||||||||||||||||||||| Sbjct 2321092 ACATTCAGAGCATTGGGCAGAAATCACATTGCGTCAACA 2321054 >seq3478 Length=3494213 Score = 98.7 bits (108), Expect = 3e-18 Identities = 88/109 (81%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||| ||||| ||||| | ||||||| |||| |||| | ||||||||||||||| ||| Sbjct 2363665 TCTTCTGCTCCACAGGTGGTTTCTGTCCTCCCTGAGCTCACCTTAGGACACCTGCATTAC 2363724 Query 66 GGTTT-AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||||||| | ||||||| |||| ||||||||| || |||| Sbjct 2363725 AGTTTGGACAGATGTACTGCCCCAGTCAAAGCCCCCACCTGCCACTGTC 2363773 >seq2911 Length=7281675 Score = 98.7 bits (108), Expect = 3e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 3630766 CCCGCCGTTTACCTGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTAGGCAG 3630825 Query 515 AAATCACATTGC 526 || ||||||| Sbjct 3630826 TCATAACATTGC 3630837 >seq1822 Length=1264002 Score = 91.5 bits (100), Expect = 5e-16 Identities = 83/104 (80%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || ||||||||| ||| ||||||| || ||||||| || ||| | |||||||||| Sbjct 90983 CTCCCTTAAGAG--TCACGATTACTCCTGCAGTTTACCTGCACTTTCTGAAATTTCTTCA 90926 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| |||||||||| |||||| |||||||| ||| | |||||| Sbjct 90925 CTTCGACATTCAGACCACTGGCCAGAAATCTCATCACCTCAACA 90882 >seq3000 Length=6698243 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79 |||| || |||| |||| |||| | ||||||||||||||||||| |||| |||| ||| Sbjct 3358100 GGAGGTTCCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACAGTTTGACAGGTGT 3358041 Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 || ||||| ||||||||||||| | || |||| Sbjct 3358040 ACCCCCCCATTCAAACTCCCCACCAGCCACTGTC 3358007 >seq2934 Length=717880 Score = 84.2 bits (92), Expect = 7e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 || |||||||| |||||||| || ||||||||||| | | | | ||| ||| | ||||| Sbjct 501361 ATTGGGACAGTAGGAATCTCATTCATCCATTCATGTCCTTTATTTATTTGATCATGAGGC 501302 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457 |||||||||| |||||||| | ||| |||| || Sbjct 501301 ATTTGGCTACTTTAAGAGAATTCTAGCTACTACC 501268 >seq1778 Length=1752511 Score = 77.0 bits (84), Expect = 1e-11 Identities = 71/89 (80%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 25 TTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGC 84 ||||||| |||| |||| | |||||||| |||||||||| |||| |||| ||| | | Sbjct 279547 TTTCTGTCCTCCCTGAGCTCACCTTAGGATACCTGCGTTACAGTTTGACAGGTGTAACAC 279606 Query 85 CCCAGCCAAACTCCCCACCTGACAATGTC 113 || || ||| ||||||||||| || |||| Sbjct 279607 CCAAGTCAA-CTCCCCACCTGCCACTGTC 279634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635141868640