Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3223 444 2e-122 seq402 351 3e-94 seq1212 316 6e-84 seq2918 188 2e-45 seq2187 178 4e-42 seq3100 120 9e-25 seq2889 113 1e-22 seq2554 100 9e-19 seq1224 95.1 4e-17 seq1755 91.5 4e-16 seq2443 84.2 7e-14 seq1157 78.8 3e-12 >seq3223 Length=3610317 Score = 444 bits (492), Expect = 2e-122 Identities = 426/535 (80%), Gaps = 38/535 (7%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 1661855 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 1661914 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1661915 TCCCCGAGTCGGGAGTG--TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 1661972 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 1661973 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 1662032 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 1662033 AGGCACATAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 1662092 Query 240 TC--AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAG----------CC 285 | | ||||| ||||| | | | ||||| || ||||||| | | || Sbjct 1662093 ACGGAGGGCCA-GCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCGCCC 1662151 Query 286 CCGA-AGG-------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GA-AGTC- 333 |||| ||| || | |||||| ||| |||||| ||| | | || || ||| Sbjct 1662152 CCGAGAGGACGCCCCGCATGGGTTTTGGGTCTGATAAATGCACGCATACCCGGAGGGTCA 1662211 Query 334 GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA--- 390 | | | || ||||||||||||||||||||| |||| |||||||| ||||| | | Sbjct 1662212 GCGCTCGTTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCA---AGTAACGGATGA 1662268 Query 391 -CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 | |||||| ||| ||||||||||||||||||||||||||||||||||||| | || Sbjct 1662269 GCGATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGC 1662328 Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 1662329 GTGTACTTAGACCTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 1662382 >seq402 Length=1890673 Score = 351 bits (388), Expect = 3e-94 Identities = 345/434 (79%), Gaps = 26/434 (6%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 1520778 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 1520837 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1520838 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 1520897 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 1520898 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 1520957 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 1520958 AGGCACATAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 1521017 Query 240 TC--AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACC---AAGGA-GCCCCGAAG 291 | | ||||| ||||| | | | ||||| || || || |||| ||||| Sbjct 1521018 ACGGAGGGCCA-GCGATCGGCTCGAGGTTATCTAGAGTCCCCCGAGAGGACGCCCC---- 1521072 Query 292 GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GA-AGTC-GGGGTTTTTAGCAT 347 || | |||||| ||| |||||| ||| | | || || ||| | | | || |||| Sbjct 1521073 -GCATGGGTTTTGGGTCTGATAAATGCACGCATACCCGGAGGGTCAGCGCTCGTTTGCAT 1521131 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA----CTATCAAATAAAC 403 ||||||||||||||||| |||| |||||||| ||||| | | | |||||| ||| Sbjct 1521132 GTATTAGCTCTAGAATTGCCACAGTTATCCA---AGTAACGGATGAGCGATCAAAGGAAC 1521188 Query 404 GATAACTGATTTAA 417 ||||||||||||| Sbjct 1521189 CATAACTGATTTAA 1521202 >seq1212 Length=995211 Score = 316 bits (350), Expect = 6e-84 Identities = 386/516 (75%), Gaps = 38/516 (7%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATT-GTCACTAC 58 |||||||||||||||||| | || | |||||| ||||||| ||||| || |||||||| Sbjct 276006 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTTCGTCACTAC 276065 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 |||| | ||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 276066 CTCCTCAAGTCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 276125 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 ||||||||||||||| || ||||| ||||||| ||||||| |||||| | | ||| | | Sbjct 276126 TTTCTCAGGCTCCCTTTCTGGAATTGAACCCTGATTCCCCATTACCCATGGTCACCGTAG 276185 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||| | ||||||||||||||||||||||||| ||| |||||| | || ||| Sbjct 276186 TAGTTACATGAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCACCGC 276245 Query 239 CTC--AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCA----------AGGAGC 284 | | | ||||| || || | | | |||| || |||||| || | | Sbjct 276246 CACGGAGGGCCA-GCAATCAGCTCGAGATTATCTAGAGTCACCAAAGTGGCTAGAGCACC 276304 Query 285 CCCGA-AGG-------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GA-AGTC 333 |||| ||| || ||||||| ||| |||||| ||| | | || || ||| Sbjct 276305 TCCGAGAGGATGCCTCGCACTGGTTTTGGGTCTGATAAATGCACGCATACCCGGAGGGTC 276364 Query 334 -GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-- 390 | | | || |||||||||| ||||||||| ||| |||| ||| ||||| | | Sbjct 276365 AGCGCTCGTTTGCATGTATTATTTCTAGAATTGCCA--GTTAACCA---AGTAACGGATG 276419 Query 391 --CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTG 448 | |||||| ||| |||||| |||||||||||||||| ||||||||||||| | Sbjct 276420 AGCGATCAAAGGAACCATAACTCATTTAATGAGCCATTCTCAGTTTCACTGTACCAGCCG 276479 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||| ||||||||| ||||||||||| |||||||||| Sbjct 276480 CTTGTACTTAGACCTGCATGGCTTAGTCTTTGAGAC 276515 >seq2918 Length=298629 Score = 188 bits (208), Expect = 2e-45 Identities = 148/176 (84%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||| | | ||| || ||||||| ||||| | |||||||| | Sbjct 25151 GTACTCATTCCAATTACAGGCCTTGAAAAAGTCCTGTATTGTTATTTTTCGTCACTACAT 25210 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||| ||||||| |||||||||||| | | ||||||||||||||||||||||||| ||| Sbjct 25211 CCCCAAGTCGGGAGTGGGTAATTTGCACTC-TGCTGCCTTCCTTGGATGTGGTAGCTGTT 25269 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCAT 176 | ||||||||||||| | |||| ||||||| |||||||||||||||| | ||||| Sbjct 25270 TTTCAGGCTCCCTCTTCAGAATTGAACCCTGATTCCCCGTTACCCGTGGTCACCAT 25325 >seq2187 Length=958137 Score = 178 bits (196), Expect = 4e-42 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 6 CATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 ||||| |||||| | || | |||||| ||||||| ||||| | |||||||||||| Sbjct 157687 CATTCACATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCATCACTACCTCCCT 157628 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 | ||||||| || | ||||| ||| |||||||||||||||||||||||| ||||| || Sbjct 157627 GAGTCGGGAGGGGATCATTTGTGCGTGTGCTGCCTTCCTTGGATGTGGTAGTCGTTTGTC 157568 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTG-ATACCATGGTAGGC 183 ||| | ||||||||||||||||||| ||||||| ||| | || | | ||||| |||| Sbjct 157567 AGGTT--CTCTCCGGAATCGAACCCTGATTCCCCATTATCTGTGGTCAAACATGGCAGGC 157510 Query 184 CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 || | |||||||||||| ||| |||| ||| |||||| |||||||| Sbjct 157509 AGATAAAGTGCCATCGAAAGTTAATATGGCAAGCATTCGAATGAGACATCGCCG 157456 >seq3100 Length=109608 Score = 120 bits (132), Expect = 9e-25 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 414 TTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTA 473 |||||||||||||||||||||||||||| | || | ||||||||| ||||||||||| Sbjct 108110 TTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGCGTGTACTTAGACCTGCATGGCTTA 108169 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||| |||||||||| Sbjct 108170 ATCTTTGAGACAAGCATATG-CTACTGGCAG 108199 >seq2889 Length=6460532 Score = 113 bits (124), Expect = 1e-22 Identities = 104/129 (81%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAAATAAACGATA 407 |||||||||||||||| |||| |||||||| ||||| | | | |||| | ||| ||| Sbjct 4347023 TATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGTGGATGAGCGATCATAGGAACCATA 4346964 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCAT 467 | |||||||||||||||||||||||||||||| | | | | ||||||||| ||||| Sbjct 4346963 AGTGATTTAATGAGCCATTCGCAGTTTCACTGCACTGGCCACATGTACTTAGACCTGCAT 4346904 Query 468 GGCTTAATC 476 |||||||| Sbjct 4346903 -GCTTAATC 4346896 >seq2554 Length=10198541 Score = 100 bits (110), Expect = 9e-19 Identities = 122/162 (75%), Gaps = 12/162 (7%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT-ATCAAATAAA 402 |||||| |||||| |||||| |||||||| || | | | | |||||| || Sbjct 9209462 GCATGT--TAGCTCCAGAATT------GTTATCCAAATAACCAAGGAGTGATCAAAGGAA 9209411 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACA 462 | ||||||||||||||||||||||| ||| ||||||| |||| | |||||| || Sbjct 9209410 CCATAACTGATTTAATGAGCCATTCACAGCTTCACTGAGGCAGTTGCATGTACTTACACC 9209351 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| |||||| ||||| |||||||| ||||||| ||| Sbjct 9209350 AGCATGGATTAATC--TGAGATAAGCATAT-ACTACTGACAG 9209312 Score = 91.5 bits (100), Expect = 4e-16 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 95 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT 154 |||||| |||||||||||||| | ||||| ||||||| ||||| |||| ||||||||| | Sbjct 9209660 TGCCTTTCTTGGATGTGGTAGGCATTTCTTAGGCTCCTTCTCCAGAATTGAACCCTAAAT 9209601 Query 155 CCCCGTTACCCGTTGATACCATGGTAGGC-CACTATCCTACCATCGAAAGTTGATAGGGC 213 | ||||||| ||||||||| || || || | |||||||||| | || ||| Sbjct 9209600 CTGTGTTACCCACAATCACCATGGTACGCACAAGAT-GTTCCATCGAAAGCTAATGGGGT 9209542 Query 214 AGAAATTTGAAT 225 || ||| |||| Sbjct 9209541 GGACATTCGAAT 9209530 >seq1224 Length=1932457 Score = 95.1 bits (104), Expect = 4e-17 Identities = 92/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| ||||||| |||| | || |||||||| | |||| ||||| | ||||||||| Sbjct 987328 TACTAATTCCAACTACAGGGCCTCAAAAGAGTCATGTACTGTTATTTTTCATCACTACCT 987269 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 | | || |||| |||||||||||| ||||||||| ||||||||| |||||||| Sbjct 987268 CTTCAGGTTGGGAATGGGTAATTTGCTTCCCTGCTGCCATCCTTGGATATGGTAGCC 987212 >seq1755 Length=1243165 Score = 91.5 bits (100), Expect = 4e-16 Identities = 154/222 (69%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||| ||||||| ||||| | ||| || ||| | |||| ||||| | ||| ||| Sbjct 510248 GTACCCATTCCAGTTACAGATCCCCCAACGAGTTCGGTATTGTTATTTTTCATCATAACC 510189 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 | | | | |||||||||||||| | | ||| || ||||||||||| | ||||| || Sbjct 510188 CCTCTGAACTGAGATTGGGTAATTTGTGTGACTGTTGGCTTCCTTGGATATAGTAGCTGT 510129 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 || ||| | ||||| | | || || || ||||| ||||| | | | || |||| Sbjct 510128 GTCCAAGGGTTCCTCTACAGGATTAAATCCGGATTCCTGGTTACTCATGGCCACGATGGC 510069 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221 | || || ||||||| | || |||| ||||||| |||| Sbjct 510068 ACGCACATAAAGTACCATCAAGAGATGATTGGGCAGATATTT 510027 >seq2443 Length=9576630 Score = 84.2 bits (92), Expect = 7e-14 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 139 GAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATC 198 |||||||||||| ||||||||||| |||| | ||||| |||||| || ||||| Sbjct 5271906 GAATCGAACCCTGATTCCCCGTTAGCCGTGGTCACCATAGTAGGCATATAAAGTACCACT 5271847 Query 199 GAAAGTTGATAGGGCAGAAATTTGAATGA 227 ||||| ||||||||||| |||||||||| Sbjct 5271846 GAAAGCTGATAGGGCAGGCATTTGAATGA 5271818 >seq1157 Length=2784775 Score = 78.8 bits (86), Expect = 3e-12 Identities = 85/109 (78%), Gaps = 8/109 (7%) Strand=Plus/Plus Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA----CTA 393 || || |||||||| |||||||||||| | | |||||| || ||||| | | | | Sbjct 194662 TTGTTTGCATGTAT-AGCTCTAGAATTGCTGCAGTTATC--TG-AGTAATGGATGAGCAA 194717 Query 394 TCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT 442 ||||| ||| ||||||||||||| || |||| ||||||||||||||| Sbjct 194718 TCAAAGGAACCATAACTGATTTAAAGAAACATTTGCAGTTTCACTGTAT 194766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510346305280