Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 217 1e-51
seq3467 123 2e-23
seq1157 107 2e-18
seq2977 95.1 1e-14
>seq3478
Length=3494213
Score = 217 bits (240), Expect = 1e-51
Identities = 397/574 (69%), Gaps = 8/574 (1%)
Strand=Plus/Minus
Query 66005 AGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATT 66064
|| || | ||| || || ||||| || || | |||||| || |||||||| |||
Sbjct 2083894 AGAGCGACAGAGGCCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATT 2083835
Query 66065 TCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTG 66124
|| ||||| || || ||||| |||||||||| |||||| || || ||||| | |||
Sbjct 2083834 TCCGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTG 2083775
Query 66125 CATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCG 66184
|| ||||| ||||| | ||||||||| || ||||| || || ||||| ||||| ||
Sbjct 2083774 CAGGCATCTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGCA 2083715
Query 66185 TGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAA-TGTTC 66243
| ||| || | ||||||||| ||| | |||| || | || || || |
Sbjct 2083714 TACCATAGCTGCTGAGCCTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATCTGGT- 2083656
Query 66244 GTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACA 66303
|||||| | ||| || || ||||| || ||| | || || | | |||||
Sbjct 2083655 GTAGAGTTCTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACA 2083596
Query 66304 CATCAGCGACCAATCACCATCCTGTTCTACAC--GACGCATAAATAGATCAGGTATCCAG 66361
|||||| ||||| || | | |||||| ||| | ||| || || ||||| |||||
Sbjct 2083595 CATCAGGGACCAGTCTTCGT--TGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCAC 2083538
Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTC 66420
||||||||||| || || | ||||| |||||||| | || ||| || || || ||
Sbjct 2083537 AGGGCGTAGAACAGGTCCCTGGCTCGCTGCTCCTCCTTTCCCGTG-TTCTTCTTCAGCTC 2083479
Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480
||||| ||||| | ||| ||||| || |||||||| |||||||| | ||| |
Sbjct 2083478 CAGGAAGTCAAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCT 2083419
Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540
|||| ||| || || || || || || || |||||| | || | |||||| || ||
Sbjct 2083418 TTTGTTGCCCCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGAC 2083359
Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574
||||||||| || ||| ||||||||| |||||
Sbjct 2083358 GAGCCCGTTGGAACAGCCGTTGGTGCCGGCGATG 2083325
>seq3467
Length=3272559
Score = 123 bits (136), Expect = 2e-23
Identities = 100/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || ||| |||||| ||||| || ||||||| || ||||||||||| |||||||
Sbjct 2317750 TGGAGCGCTTCATGCAGGAAGTGCAGGTAACGGAGGCCCGGTGTTTCTACGGTTTCCAGA 2317809
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375
| ||||||||||| ||||||| ||||||||||| | || ||||| |||||||||| ||
Sbjct 2317810 TCGCCATGGAGAACATCCACTCAGAGATGTACAGCCTGCTGATCGACACGTACATCAAGG 2317869
Query 61376 A 61376
|
Sbjct 2317870 A 2317870
Score = 123 bits (136), Expect = 2e-23
Identities = 100/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || ||| |||||| ||||| || ||||||| || ||||||||||| |||||||
Sbjct 2329200 TGGAGCGCTTCATGCAGGAAGTGCAGGTAACGGAGGCCCGGTGTTTCTACGGTTTCCAGA 2329141
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375
| ||||||||||| ||||||| ||||||||||| | || ||||| |||||||||| ||
Sbjct 2329140 TCGCCATGGAGAACATCCACTCAGAGATGTACAGCCTGCTGATCGACACGTACATCAAGG 2329081
Query 61376 A 61376
|
Sbjct 2329080 A 2329080
Score = 91.5 bits (100), Expect = 1e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101
|| || ||||| || ||||| | |||||||||||||| | ||||| |||| ||||||
Sbjct 2317383 GACAACCCTCGCCGCTTCGTCATCTTCCCCATCGAGTACCACGATATCTGGCAGATGTAC 2317442
Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139
|| ||||| || || ||||||||||||| ||||||||
Sbjct 2317443 AAGAAGGCAGAGGCGTCCTTCTGGACGGCAGAGGAGGT 2317480
Score = 91.5 bits (100), Expect = 1e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101
|| || ||||| || ||||| | |||||||||||||| | ||||| |||| ||||||
Sbjct 2329567 GACAACCCTCGCCGCTTCGTCATCTTCCCCATCGAGTACCACGATATCTGGCAGATGTAC 2329508
Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139
|| ||||| || || ||||||||||||| ||||||||
Sbjct 2329507 AAGAAGGCAGAGGCGTCCTTCTGGACGGCAGAGGAGGT 2329470
>seq1157
Length=2784775
Score = 107 bits (118), Expect = 2e-18
Identities = 119/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
|| ||||| || || || ||||||||||| ||| | || ||||||| || || |||
Sbjct 2749614 GTGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATAGTGCCCAGGTTTTGCTGA 2749555
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|||||||| | ||||| ||||||||||| | |||||| || || || || || ||
Sbjct 2749554 TTACTCTTTCTGTTGCAGGCATCCTTGTAAACCATGTATGGTGTACCAGTTTCTGTCTGC 2749495
Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
|||||||||||||||| ||| || | |||||||||
Sbjct 2749494 GACTCAATGATGGCGTACCACAGCTGCTGAGCCTTCACC 2749456
>seq2977
Length=7416971
Score = 95.1 bits (104), Expect = 1e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
||||||||||| || | || ||||| | |||||| |||| ||||| ||| |||| |
Sbjct 6483446 CAGGAGGTGCAGGTCCCTGAAGCGCGATCCTTCTACAGCTTTCAGATCCTCATAGAGACT 6483387
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|||||||| |||||||||||| | |||||| | || ||||| |||||
Sbjct 6483386 GTCCACTCAGAGATGTACAGTATGCTCATCAACACTTACATTAGGGA 6483340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397550774745200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |