Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3478 217 1e-51 seq3467 123 2e-23 seq1157 107 2e-18 seq2977 95.1 1e-14 >seq3478 Length=3494213 Score = 217 bits (240), Expect = 1e-51 Identities = 397/574 (69%), Gaps = 8/574 (1%) Strand=Plus/Minus Query 66005 AGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATT 66064 || || | ||| || || ||||| || || | |||||| || |||||||| ||| Sbjct 2083894 AGAGCGACAGAGGCCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATT 2083835 Query 66065 TCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTG 66124 || ||||| || || ||||| |||||||||| |||||| || || ||||| | ||| Sbjct 2083834 TCCGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTG 2083775 Query 66125 CATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCG 66184 || ||||| ||||| | ||||||||| || ||||| || || ||||| ||||| || Sbjct 2083774 CAGGCATCTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGCA 2083715 Query 66185 TGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAA-TGTTC 66243 | ||| || | ||||||||| ||| | |||| || | || || || | Sbjct 2083714 TACCATAGCTGCTGAGCCTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATCTGGT- 2083656 Query 66244 GTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACA 66303 |||||| | ||| || || ||||| || ||| | || || | | ||||| Sbjct 2083655 GTAGAGTTCTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACA 2083596 Query 66304 CATCAGCGACCAATCACCATCCTGTTCTACAC--GACGCATAAATAGATCAGGTATCCAG 66361 |||||| ||||| || | | |||||| ||| | ||| || || ||||| ||||| Sbjct 2083595 CATCAGGGACCAGTCTTCGT--TGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCAC 2083538 Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTC 66420 ||||||||||| || || | ||||| |||||||| | || ||| || || || || Sbjct 2083537 AGGGCGTAGAACAGGTCCCTGGCTCGCTGCTCCTCCTTTCCCGTG-TTCTTCTTCAGCTC 2083479 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 ||||| ||||| | ||| ||||| || |||||||| |||||||| | ||| | Sbjct 2083478 CAGGAAGTCAAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCT 2083419 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 |||| ||| || || || || || || || |||||| | || | |||||| || || Sbjct 2083418 TTTGTTGCCCCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGAC 2083359 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 ||||||||| || ||| ||||||||| ||||| Sbjct 2083358 GAGCCCGTTGGAACAGCCGTTGGTGCCGGCGATG 2083325 >seq3467 Length=3272559 Score = 123 bits (136), Expect = 2e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| |||||| ||||| || ||||||| || ||||||||||| ||||||| Sbjct 2317750 TGGAGCGCTTCATGCAGGAAGTGCAGGTAACGGAGGCCCGGTGTTTCTACGGTTTCCAGA 2317809 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||| ||||||||||| | || ||||| |||||||||| || Sbjct 2317810 TCGCCATGGAGAACATCCACTCAGAGATGTACAGCCTGCTGATCGACACGTACATCAAGG 2317869 Query 61376 A 61376 | Sbjct 2317870 A 2317870 Score = 123 bits (136), Expect = 2e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| |||||| ||||| || ||||||| || ||||||||||| ||||||| Sbjct 2329200 TGGAGCGCTTCATGCAGGAAGTGCAGGTAACGGAGGCCCGGTGTTTCTACGGTTTCCAGA 2329141 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||| ||||||||||| | || ||||| |||||||||| || Sbjct 2329140 TCGCCATGGAGAACATCCACTCAGAGATGTACAGCCTGCTGATCGACACGTACATCAAGG 2329081 Query 61376 A 61376 | Sbjct 2329080 A 2329080 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || || ||||| || ||||| | |||||||||||||| | ||||| |||| |||||| Sbjct 2317383 GACAACCCTCGCCGCTTCGTCATCTTCCCCATCGAGTACCACGATATCTGGCAGATGTAC 2317442 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || ||||| || || ||||||||||||| |||||||| Sbjct 2317443 AAGAAGGCAGAGGCGTCCTTCTGGACGGCAGAGGAGGT 2317480 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || || ||||| || ||||| | |||||||||||||| | ||||| |||| |||||| Sbjct 2329567 GACAACCCTCGCCGCTTCGTCATCTTCCCCATCGAGTACCACGATATCTGGCAGATGTAC 2329508 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || ||||| || || ||||||||||||| |||||||| Sbjct 2329507 AAGAAGGCAGAGGCGTCCTTCTGGACGGCAGAGGAGGT 2329470 >seq1157 Length=2784775 Score = 107 bits (118), Expect = 2e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 || ||||| || || || ||||||||||| ||| | || ||||||| || || ||| Sbjct 2749614 GTGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATAGTGCCCAGGTTTTGCTGA 2749555 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 |||||||| | ||||| ||||||||||| | |||||| || || || || || || Sbjct 2749554 TTACTCTTTCTGTTGCAGGCATCCTTGTAAACCATGTATGGTGTACCAGTTTCTGTCTGC 2749495 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 |||||||||||||||| ||| || | ||||||||| Sbjct 2749494 GACTCAATGATGGCGTACCACAGCTGCTGAGCCTTCACC 2749456 >seq2977 Length=7416971 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | || ||||| | |||||| |||| ||||| ||| |||| | Sbjct 6483446 CAGGAGGTGCAGGTCCCTGAAGCGCGATCCTTCTACAGCTTTCAGATCCTCATAGAGACT 6483387 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||| |||||||||||| | |||||| | || ||||| ||||| Sbjct 6483386 GTCCACTCAGAGATGTACAGTATGCTCATCAACACTTACATTAGGGA 6483340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397550774745200