Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq67 214 1e-50
seq30 107 2e-18
>seq67
Length=1635559
Score = 214 bits (236), Expect = 1e-50
Identities = 611/928 (66%), Gaps = 20/928 (2%)
Strand=Plus/Minus
Query 66005 AGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGC-GGTATACTCGACAAT 66063
|| |||| || || || || ||||| |||| ||| || | || ||| || || || ||
Sbjct 32809 AGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATC-GTCGCTGGTGTATTCAACGAT 32751
Query 66064 TTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATT 66123
||| ||||| || || |||| || ||||||| |||||| || || ||||| || ||
Sbjct 32750 TTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTCTTTCGGTT 32691
Query 66124 GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGC 66183
||| || || ||||||| ||||||||| || ||||| || |||||||||||||||||
Sbjct 32690 GCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCAATGATGGC 32631
Query 66184 GTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTA-ATG-T 66241
|||||| | | ||||||||| ||| |||| || | | ||| | |||
Sbjct 32630 GTGCCACACCTGCTGAGCCTTCACCACACGCTTGACCCTCCCCT--CCTTCTCATATGAA 32573
Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301
|||||| | || || |||||||| ||| ||| | ||||||| | |||
Sbjct 32572 GTGTAGAGCTTCTCAAACTCCTCACCCCAACACTCGTCCAGCCCGGGACACTCATTGGGA 32513
Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361
|||||||| ||||| || | ||| || | ||| || | ||||| |||||
Sbjct 32512 CACATCAGAGACCAGTCTTGGTTGCTTTCCACTCTCTTCATGAACAAGTCAGGGATCCAC 32453
Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTC 66420
||||||||||| || || | || | |||||||| | || ||| || || || ||
Sbjct 32452 AGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTC 32394
Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480
||||| ||||| | ||| ||||| || |||||||| |||||||| | || |
Sbjct 32393 CAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGCGAAGGCTCCGGGTCT 32334
Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540
|||| ||| || |||||||| || || || |||||| | || | || ||| || ||
Sbjct 32333 TTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGAC 32274
Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600
| |||||| || ||||| || |||||| | ||| | ||| || | || |
Sbjct 32273 TAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCTGTTGATCTGATGCAGCT 32214
Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCG 66660
||| || ||| || || || |||| ||| |||||| ||||| | || ||
Sbjct 32213 GACAGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCACACTGCTTCAGAGTGTC 32154
Query 66661 GAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA--TGAACTAAGTTGG 66718
| | ||||| || ||| ||| |||| |||| || ||| |||| || || || ||
Sbjct 32153 GTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGAC--AGCTGA 32096
Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778
|| || || |||| |||||| || || | ||||| || || | | |||
Sbjct 32095 GGCCTGTTGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGAACCACTTCTCCGAC 32036
Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838
| ||||| ||||| ||| | || || |||| | || || || | | |
Sbjct 32035 AGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGGATGCCAACAGAAACC 31976
Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTA 66894
| ||| || | || || || |||||| ||| |||| ||||| | || | |||
Sbjct 31975 CTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCG----TTGATCTTCAGCAGGTA 31920
Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAG 66922
||| || ||||| ||||||| ||||||
Sbjct 31919 GGACCGCTCCAGAGTCTTGAAGCCAAAG 31892
>seq30
Length=3550406
Score = 107 bits (118), Expect = 2e-18
Identities = 119/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
|| ||||| || || || |||||||| || ||| | |||||||||| ||||| ||
Sbjct 773353 GTGTACTCTACGATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGG 773294
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|| ||||| | |||||| ||||||||||| | ||||||||| || || || || ||
Sbjct 773293 TTGCTCTTCCCATTGCAGGCATCCTTGTAAAGCATGTACGGGGTTCCCGTTTCCGTCTGA 773234
Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
||||| |||||||||| ||| || | |||||||||
Sbjct 773233 GACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACC 773195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397537503304160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |