Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq67 214 1e-50 seq30 107 2e-18 >seq67 Length=1635559 Score = 214 bits (236), Expect = 1e-50 Identities = 611/928 (66%), Gaps = 20/928 (2%) Strand=Plus/Minus Query 66005 AGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGC-GGTATACTCGACAAT 66063 || |||| || || || || ||||| |||| ||| || | || ||| || || || || Sbjct 32809 AGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATC-GTCGCTGGTGTATTCAACGAT 32751 Query 66064 TTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATT 66123 ||| ||||| || || |||| || ||||||| |||||| || || ||||| || || Sbjct 32750 TTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTCTTTCGGTT 32691 Query 66124 GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGC 66183 ||| || || ||||||| ||||||||| || ||||| || ||||||||||||||||| Sbjct 32690 GCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCAATGATGGC 32631 Query 66184 GTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTA-ATG-T 66241 |||||| | | ||||||||| ||| |||| || | | ||| | ||| Sbjct 32630 GTGCCACACCTGCTGAGCCTTCACCACACGCTTGACCCTCCCCT--CCTTCTCATATGAA 32573 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 |||||| | || || |||||||| ||| ||| | ||||||| | ||| Sbjct 32572 GTGTAGAGCTTCTCAAACTCCTCACCCCAACACTCGTCCAGCCCGGGACACTCATTGGGA 32513 Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361 |||||||| ||||| || | ||| || | ||| || | ||||| ||||| Sbjct 32512 CACATCAGAGACCAGTCTTGGTTGCTTTCCACTCTCTTCATGAACAAGTCAGGGATCCAC 32453 Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTC 66420 ||||||||||| || || | || | |||||||| | || ||| || || || || Sbjct 32452 AGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTC 32394 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 ||||| ||||| | ||| ||||| || |||||||| |||||||| | || | Sbjct 32393 CAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGCGAAGGCTCCGGGTCT 32334 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 |||| ||| || |||||||| || || || |||||| | || | || ||| || || Sbjct 32333 TTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGAC 32274 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 | |||||| || ||||| || |||||| | ||| | ||| || | || | Sbjct 32273 TAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCTGTTGATCTGATGCAGCT 32214 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCG 66660 ||| || ||| || || || |||| ||| |||||| ||||| | || || Sbjct 32213 GACAGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCACACTGCTTCAGAGTGTC 32154 Query 66661 GAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA--TGAACTAAGTTGG 66718 | | ||||| || ||| ||| |||| |||| || ||| |||| || || || || Sbjct 32153 GTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGAC--AGCTGA 32096 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 || || || |||| |||||| || || | ||||| || || | | ||| Sbjct 32095 GGCCTGTTGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGAACCACTTCTCCGAC 32036 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 | ||||| ||||| ||| | || || |||| | || || || | | | Sbjct 32035 AGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGGATGCCAACAGAAACC 31976 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTA 66894 | ||| || | || || || |||||| ||| |||| ||||| | || | ||| Sbjct 31975 CTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCG----TTGATCTTCAGCAGGTA 31920 Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAG 66922 ||| || ||||| ||||||| |||||| Sbjct 31919 GGACCGCTCCAGAGTCTTGAAGCCAAAG 31892 >seq30 Length=3550406 Score = 107 bits (118), Expect = 2e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 || ||||| || || || |||||||| || ||| | |||||||||| ||||| || Sbjct 773353 GTGTACTCTACGATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGG 773294 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| | |||||| ||||||||||| | ||||||||| || || || || || Sbjct 773293 TTGCTCTTCCCATTGCAGGCATCCTTGTAAAGCATGTACGGGGTTCCCGTTTCCGTCTGA 773234 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 ||||| |||||||||| ||| || | ||||||||| Sbjct 773233 GACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACC 773195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397537503304160