Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq120 100 8e-17 >seq120 Length=812315 Score = 100 bits (110), Expect = 8e-17 Identities = 159/225 (71%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 33703 CCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGC 33762 ||||| | ||||||||||| || ||||| |||| |||||| |||| |||||||||||| Sbjct 48376 CCTTTTCGCAGATACTCACCCGCGATTTCGGCGATCTTGCCGAAGAACACTACGCGGTGC 48317 Query 33763 CATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATCATTCCATGATTCCGAT-GTAGC 33821 || || || |||||| | || || || |||||| ||||| | || || | || || Sbjct 48316 CACTCGGTACGCTCCTGCTGCTGGCCGGTCTGCTTATCTTTCCA-GCTTTCGCTGGTGGC 48258 Query 33822 AACAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCC 33881 | | || ||| | || ||| ||| || || |||| || ||||| ||||| ||| Sbjct 48257 CAGGGTTATGTTCGTTACGGCGTTGCCGTTCGGGGTGTAGCGGACTTCCGGGTCGCCGCC 48198 Query 33882 TAATGTGCCGAGGATGATTACTTTATTTACGCCGCGAGTTGCCAT 33926 |||||| || || ||||| || ||||| || |||||| Sbjct 48197 GGCGTTGCCGACGAGAATCACTTTGTTGACGCCTCG---TGCCAT 48156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144961964551712