Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq11 154 2e-35 seq23 127 3e-27 seq22 125 1e-26 seq34 116 6e-24 seq13 91.5 2e-16 >seq11 Length=13962742 Score = 154 bits (170), Expect = 2e-35 Identities = 180/235 (77%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||| ||||||| |||||||| ||||||| |||||| | Sbjct 258994 GTACAAAGGGCAGGGACTTAATCAACACGAGCTT-ATGACTCGTGCTTACTGGGAATT-C 258937 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| || ||||||||| | ||||| ||||||| |||| | || Sbjct 258936 CTCGTTCTTTGGAAATAATTGCAATCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 258877 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 |||| ||| ||||| |||| | | || | ||| | || ||||||| || ||||||| Sbjct 258876 ACCCACGCCTCTCGGCGAAGGGTAGACACATGCTGA-TCCACTCAGTGTGGCACGCGTGC 258818 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 258817 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAAGCTCGTGTGGC 258764 Score = 100 bits (110), Expect = 4e-19 Identities = 112/146 (77%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTC 132 || ||||||||| | ||||| ||||||| |||| | |||||| ||| || Sbjct 95400 AATAATTGCAATCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTTACCCACGCCTCTC 95459 Query 133 GGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGCGGCCCAGAACATC 191 ||| |||| | | || || ||| | || ||||||| |||||||||| |||| | ||||| Sbjct 95460 GGCGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGCAGCCCCGGACATC 95518 Query 192 TAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||| Sbjct 95519 TAAGGGCATCACAGACCTGTTATTGC 95544 >seq23 Length=5534081 Score = 127 bits (140), Expect = 3e-27 Identities = 174/235 (74%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| | |||||| ||||| || ||||||| | |||| | Sbjct 24951 GTACAAAGGGCAGGGACTTAATCAAAGTGAGCTT-ATGACCCGTGCTTACTGGCAATT-C 25008 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||||| | | || ||||||||| | ||| | ||||||| |||| | || Sbjct 25009 TTCGTTCATGGGAAATAATTGCAATCCCCAATCTCTATCACGAATGGGGTTCAGCGGGTT 25068 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 |||| |||| |||| |||| | | || || ||| |||| ||||||| ||| ||| Sbjct 25069 ACCCACACCTCTCGGTGAAGGGTAGACACACGCTGA-TACACTCAGTGTGAAACGCATGC 25127 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | ||||||||||||||||||||| ||||||| ||||| || ||||| Sbjct 25128 AGCCCCGGACATCTAAGGGCATCACAGACATGTTATT-TCTCAATCTCGTGTGGC 25181 >seq22 Length=5544135 Score = 125 bits (138), Expect = 1e-26 Identities = 167/224 (75%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||| |||| || |||||| |||||| ||||| ||| |||||| |||||| | Sbjct 5520838 GTACAAAGGGCAAGGACTTAATCAACGTGAGCTT-ATGACCCGCACTTACTGGGAATT-C 5520781 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||| |||||| |||| | || Sbjct 5520780 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCACTCACGAGTGGGGTTCAGCGGGTT 5520721 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAA-TACATCAGTGTAGCGCGCGTGC 178 |||| ||| ||||| |||| | | || || ||| ||| |||||| || ||||| Sbjct 5520720 ACCCACGCCTCTCGGCGAAGGGTAGACACACGCTGATCTAC-TCAGTGCGAAGCTCGTGC 5520662 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 |||| | ||||||||||||||||||||| |||| ||| || || Sbjct 5520661 AGCCCCGGACATCTAAGGGCATCACAGACATGTT-TTGGCTGAA 5520619 >seq34 Length=14110343 Score = 116 bits (128), Expect = 6e-24 Identities = 162/223 (73%), Gaps = 13/223 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||| |||||||||||| || |||||| || ||| ||||| | |||||||| |||||| | Sbjct 1298223 GTACGAAGGGCAGGGACATAATCAACGTGAACTT-ATGACCCACGCTTACTGGGAATT-C 1298280 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || ||||||||| | ||||| |||||| |||| | | Sbjct 1298281 CTCGTTCGTGGGGAATAATTGCAATCCCCAGTCCCCGTCACGAGTGGGGTTCAGCGGGT- 1298339 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGCG 179 | ||||| |||| | | || || || | || ||||||| ||||| |||| Sbjct 1298340 --------TATCGGCGAAGGGTAAACACACGCTGTGTCCACTCAGTGTGGCGCGAGTGCA 1298391 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 |||| | ||||||||| |||||||||||||||||||| ||||| Sbjct 1298392 GCCCCGGACATCTAAGCGCATCACAGACCTGTTATTG-CTCAA 1298433 >seq13 Length=7545250 Score = 91.5 bits (100), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||| | ||||| |||||||||| |||| ||| Sbjct 1904630 GTACAAAGGGCAGGGACTTAATCAACGCGAGCAT-ATGACCCGCGCTTACTGGGAA-TTC 1904687 Query 61 CTCGTTGAAGACCAACAATTGCAATGATC-TATCCCCATCACGA 103 |||||| | | || ||||||||| | ||||| ||||||| Sbjct 1904688 CTCGTTCATGGTAAATAATTGCAATCCCCAAATCCCTATCACGA 1904731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751959553680