Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq55 107 1e-21 seq34 107 1e-21 seq78 98.7 6e-19 seq22 80.6 1e-13 >seq55 Length=4898074 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || | | |||| ||| |||| ||||| |||| Sbjct 4400409 GAACCCAAAGACTTTGGTTTCCCGGACGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 4400468 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 4400469 GATCGCTAGTTGGCATCGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 4400525 >seq34 Length=14110343 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| ||||||| | | |||| ||| |||| |||||| | || Sbjct 1298747 GAACCCAAAGACTTTGGTTTCTCGGACGCTGCCCGGCGGGTCATGGGAATAACACCACCG 1298806 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 1298807 GATTGCTAGTTGGCATCGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 1298863 >seq78 Length=1497051 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||| | | | |||| ||| |||| ||||| |||| Sbjct 525272 GAACCCAAAGACTTTAGTTTCCTGGACGTTGCCCGGCGGGTCATGGGAATAACGCCGCCG 525213 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 525212 GATCGCTAGTTGGCATCGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 525156 >seq22 Length=5544135 Score = 80.6 bits (88), Expect = 1e-13 Identities = 88/117 (75%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| | | | |||| || |||| ||||| |||| Sbjct 5520438 GAACCCAAAGACTTTGGTTTCCCAGACGCTGCCCGGCAGGTCATGGGAATAACGCCGCCA 5520379 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| ||||||| | ||||||||| | ||||| Sbjct 5520378 GATCGCTAGTTGGCATCGTTTACGGTCGGAACTACGATGCTATCTGATCATTTTCGA 5520322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278385509280