Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq55 167 4e-39 seq34 129 1e-27 seq22 114 2e-23 seq23 87.8 3e-15 seq65 80.6 5e-13 >seq55 Length=4898074 Score = 167 bits (184), Expect = 4e-39 Identities = 210/282 (74%), Gaps = 10/282 (4%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || | | | | | |||||||||||||||||||||||| Sbjct 4400812 ATGCTCTTAGCTGAGTGTCCCGCGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 4400753 Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||||| | || |||||| ||| |||||||| ||||||||| | |||| Sbjct 4400752 TCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 4400694 Query 156 TCTATTTTGTTGGT----TTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGT 210 |||||||||| ||| |||| |||| | | |||||||| ||||| | |||||| Sbjct 4400693 TCTATTTTGTGGGTTTTCTTCTCTGACCTGGGGCCATGATTAAGAGGGACGGCCGGGGGC 4400634 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| | |||||||||||||||||| ||||| | | ||||| Sbjct 4400633 ATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGGCGAAAGCGAA 4400574 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||| || ||||| |||||||||||||||| |||||||||| Sbjct 4400573 AGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 4400533 >seq34 Length=14110343 Score = 129 bits (142), Expect = 1e-27 Identities = 177/243 (73%), Gaps = 16/243 (7%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTA-GAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTAGCA 129 |||||||||||||||| | |||||||||||||||||| |||| ||||||| ||| Sbjct 1299101 TTTACTTTGAAAAAATAAAGAGTGTTCAAAGCAGGCCCCGGTTGCCCGAATACCGCAGCT 1299042 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||| ||||||||| | ||||||| || | | | || | | |||| Sbjct 1299041 AGGAATAATGGAATAGGAC-TCCGGTTCT-TTCTCT---------GAACTGGGGCCATGA 1298993 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||||| | |||||| | ||||| | | ||||||||||| ||||||| Sbjct 1298992 TTAAGAGGGACGGCCGGGGGCATTCGTATTGTGTCGCTAGAGGTGAAATACTTGGATCGT 1298933 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||| | | || ||||| || |||||| |||||||||||||||| ||||||| Sbjct 1298932 CGCAAGACGGGCGAAAGCAAAAGCATTTACCAAGAATGTTTTCATTAATCA-AGAACGAA 1298874 Query 310 AGT 312 ||| Sbjct 1298873 AGT 1298871 >seq22 Length=5544135 Score = 114 bits (126), Expect = 2e-23 Identities = 177/248 (71%), Gaps = 10/248 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTAGCAT 130 ||||||||||||||||| |||||||||||||||||| | || |||||| ||| Sbjct 5520070 TTTACTTTGAAAAAATTTGAGTGTTCAAAGCAGGCCCCGGTCGCCTGAATACCGCAGCTA 5520129 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTTCT----AGGACCGCCGTA 185 |||||||| ||||||||| | | ||||||||| || || ||||| | || | | Sbjct 5520130 GGAATAATGGAATAGGAC-TCCAGTTCTATTTCGTAGGTTTTCTTCACTGAACTGGGGCC 5520188 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| |||||| | || || | ||||| | |||| ||| ||| ||||| Sbjct 5520189 ATGATTAAGAGGGATGGCCGATGGCATTTGTATTGTGCCGCTAGAGTTGACATTTTTGGA 5520248 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| | | ||||||| || ||||| ||||||||||||||| ||| Sbjct 5520249 CCGGCGCAAGACGGGCGAAATCGAAAGCATTTGCCAAGACTGTTTTCATTAATCA-AGAA 5520307 Query 306 CGAAAGTT 313 |||||||| Sbjct 5520308 CGAAAGTT 5520315 >seq23 Length=5534081 Score = 87.8 bits (96), Expect = 3e-15 Identities = 134/187 (72%), Gaps = 7/187 (4%) Strand=Plus/Minus Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT----CTAGGACC-GCCGTA 185 |||||||| ||||||||| | | |||||||||||| ||||| || || | | || Sbjct 25546 GGAATAATGGAATAGGAC-TCCAGTTCTATTTTGTAGGTTTTCTTCTCTGAACTGGTGTC 25488 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| | ||| || | ||||| | |||||||||||||||||| Sbjct 25487 ATGATTAAGAGGGAAGGCCGGTGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 25428 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| | |||||||| || ||||| |||||||||||||||| ||| Sbjct 25427 CCAGGGCAAGACAGGTGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 25369 Query 306 CGAAAGT 312 | ||||| Sbjct 25368 CAAAAGT 25362 >seq65 Length=3087625 Score = 80.6 bits (88), Expect = 5e-13 Identities = 98/130 (75%), Gaps = 4/130 (3%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| |||| |||| ||| || | | | | ||| | |||||||| |||||| Sbjct 1653457 ATGCTCTTAACTGAGTGTCCCGCGGGGTCCGACGCGTTTTTTAAAAAAAAATTTGAGTGT 1653516 Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||||| | || |||||| ||| |||||||| ||||||||| | |||| Sbjct 1653517 TCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 1653575 Query 156 TCTATTTTGT 165 |||||||||| Sbjct 1653576 TCTATTTTGT 1653585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915149188096