Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq22 129 2e-27 seq6 114 5e-23 seq28 107 8e-21 seq15 75.2 5e-11 >seq22 Length=5544135 Score = 129 bits (142), Expect = 2e-27 Identities = 125/160 (78%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||| | || |||| |||||| | | ||||| ||||||| Sbjct 5527805 GAGTCGAGTTGTTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 5527864 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | || ||||||||||| ||||||| || | ||||| |||||| |||||| | Sbjct 5527865 ACCAGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAATAACTTTG--A 5527922 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||||| ||| || || Sbjct 5527923 AGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 5527962 Score = 125 bits (138), Expect = 3e-26 Identities = 96/114 (84%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||| |||||||||||||||| |||| ||| ||||| |||||||||||||| Sbjct 5528583 GGACCCGAAAAATGGTGAACTATGCCTTGGCAGGGCGAAACCAGAAGAAACTCTGGTGGA 5528642 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||| || || ||| ||| ||||||||||| ||||| | |||||||||||||| Sbjct 5528643 GGCACGTAGTGGTCCTGACGTGCAAATCGGTCGTCCTACCTGGGTATAGGGGCG 5528696 >seq6 Length=17716291 Score = 114 bits (126), Expect = 5e-23 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 11517357 GGACCTGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGG 11517416 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 ||| || |||||| ||| | |||||||| ||||| | ||| |||| Sbjct 11517417 GGCCCGTAGCGGTCCTGACATGCAAATCTGTCGTCTGACCTGGCTATA 11517464 >seq28 Length=8474801 Score = 107 bits (118), Expect = 8e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 3277862 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 3277921 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 | ||| ||||||||||| ||||||| |||| ||||| ||||||| |||||| Sbjct 3277922 ACCGGCACGAGACCGATAGTCGACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTG 3277978 >seq15 Length=6991231 Score = 75.2 bits (82), Expect = 5e-11 Identities = 62/76 (82%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645 ||||||||||| |||| ||||||||||||||||||||| ||| || |||||| ||| Sbjct 632073 AACTATGCCTGGGCAGGGCAAAGCCAGAGGAAACTCTGGTGAGGGCCCGGAGCGGTCCTG 632014 Query 646 GCGTGCAAATCGATCG 661 | || |||||| ||| Sbjct 632013 ACATGTAAATCGGTCG 631998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079880909600