Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq55 190 3e-46 seq34 190 3e-46 seq52 147 3e-33 seq11 143 4e-32 seq10 136 6e-30 seq78 125 1e-26 seq23 111 3e-22 seq22 100 5e-19 >seq55 Length=4898074 Score = 190 bits (210), Expect = 3e-46 Identities = 187/236 (79%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 29 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGG 88 ||||| |||| | ||||||||||||||||||||||||||||||| ||| || | ||| Sbjct 4400048 CGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCAGTCT-CGTGTGG 4400105 Query 89 CTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC--ATAGTCGATGGGG---CT 143 || | |||| | |||||||||||||| | || ||| || | | | | || Sbjct 4400106 CTCAATGCCACTTGTCCCTCTAAGAAGTTGGATGCCGACCGCATGGGGGCCCGCGTAACT 4400165 Query 144 ATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAAC 203 | || ||| | | ||||| || ||||| |||||| ||||||||||||||||||||||| Sbjct 4400166 AGTTGGCATGCTGGAGTCTCATTTGTTATTGGAATTTACCAGACAAATCACTCCACCAAC 4400225 Query 204 TAAGAACGGCCATGCACCACCACCCATAGAATCAAG-AAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||| |||||| || ||| ||||||||||||||| Sbjct 4400226 TAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAAAAGCTATCAATCTGTC 4400281 Score = 84.2 bits (92), Expect = 3e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||| | | ||||| || ||||| ||||||||||||||||| ||||| | Sbjct 143507 CTATTTAGCATGCCACAGTCTCATTAGTTATTAGAATTAACCAGACAAATTGTTCCACTA 143448 Query 202 ACTAAGAACGGCCATGCACCACCA 225 |||||||| |||||||||| |||| Sbjct 143447 ACTAAGAATGGCCATGCACTACCA 143424 >seq34 Length=14110343 Score = 190 bits (210), Expect = 3e-46 Identities = 195/251 (78%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||| ||||| |||| |||| | ||||||||| ||||||||||||||||||||| || Sbjct 1298373 TCAGTGTGGCGCGAGTGCAGCCCCGGACATCTAAGCGCATCACAGACCTGTTATTGC-TC 1298431 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135 || | | |||||| | |||| | || ||| |||||| | ||| ||| | || Sbjct 1298432 AATCA-CGTGTGGCTGAACGCCACTTATCGCTCAAAGAAGTTGGACACTGACCGCA--CG 1298488 Query 136 ATGGGGCTATTTAGCAGGTTAAG--------GTCTCGTTCGTTATCGGAATTAACCAGAC 187 |||||| | || | | || ||||||||| |||||||||||||| |||| Sbjct 1298489 G-GGGGCTGTGTAACTAGATAGAATGCCGGAGTCTCGTTCCTTATCGGAATTAACTAGAC 1298547 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||| || ||||||||||||||||||| |||||| |||||||||| Sbjct 1298548 AAATCGCTCCACCAACTACAAATGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCT 1298607 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 1298608 ATCAATCTGTC 1298618 >seq52 Length=8204060 Score = 147 bits (162), Expect = 3e-33 Identities = 186/251 (74%), Gaps = 16/251 (6%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 |||||| || |||||| || | || |||||| |||||| | ||||||||||| ||| Sbjct 76138 CAGTGTGGCAGGCGTGCAAACCTGGACTTCTAAGAGCATCATATACCTGTTATTGT-TCA 76080 Query 77 AACTTCCAT-TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135 | || ||| ||||| | ||| | |||||||||||||| | | | || | || Sbjct 76079 ATCT--CATGTGGCTCAACGCCGCTTGTCCCTCTAAGAAGTTGGACGCTGAC--TGCCCG 76024 Query 136 ATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 |||| ||| |||||| | |||||||| || || |||||||||||||| Sbjct 76023 --GGGGTCGCATAACTAGTTAGCATGCCGGAGTCTCGTTTGTCATTGGAATTAACCAGAC 75966 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 |||||||| ||||| || ||||| ||||| | |||| |||| ||||||||||||||||| Sbjct 75965 AAATCACTTGACCAATTAGGAACGACCATGTAACACCCCCCAGAGAATCAAGAAAGAGCT 75906 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 75905 ATCAATCTGTC 75895 >seq11 Length=13962742 Score = 143 bits (158), Expect = 4e-32 Identities = 179/247 (72%), Gaps = 30/247 (12%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||| || ||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 258835 TCAGTGTGGCACGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 258777 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC--CATAGT 133 || | || |||||| | |||| | | |||||||||||| || ||| || ||| | Sbjct 258776 AAGC-TCGTGTGGCTGAACGCCACTTGACCCTCTAAGAAGTTAGACACTGACCGCATGGG 258718 Query 134 CGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | | | ||| |||||| | ||||| |||||||||||||||||| |||||||| Sbjct 258717 GGCCGCGTAACTAGTTAGCATGCAGGAGTCTCATTCGTTATCGGAATTAACTAGACAAAT 258658 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 ||| |||||||||| |||||| |||||||||||||| Sbjct 258657 AACT------------------------CCACCACCCACAGAATCGAGAAAGAGCTATCA 258622 Query 252 ATCTGTC 258 ||||||| Sbjct 258621 ATCTGTC 258615 Score = 86.0 bits (94), Expect = 1e-14 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 ||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 95488 TCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 95544 >seq10 Length=24626513 Score = 136 bits (150), Expect = 6e-30 Identities = 102/119 (86%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | ||||||||| ||||||||||||||| ||||||| |||||||| Sbjct 15383049 CTAGTTAGCATGCCAGAGTCTCGTTCATTATCGGAATTAACCGCACAAATCGCTCCACCA 15383108 Query 202 ACTAAGAACGGCCATGCACCACCAC---CCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||||||||||||||||||||| || |||||| |||||||||||||||||||| Sbjct 15383109 GCTAAGAACGGCCATGCACCACCACCGTCCCAAGAATCGAGAAAGAGCTATCAATCTGT 15383167 >seq78 Length=1497051 Score = 125 bits (138), Expect = 1e-26 Identities = 75/79 (95%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||| |||||||||||||||||||||||||||||||||||| |||||| || Sbjct 525478 AATCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAG 525419 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 525418 AAAGAGCTATCAATCTGTC 525400 >seq23 Length=5534081 Score = 111 bits (122), Expect = 3e-22 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||| ||||||||||||||||||||||||||| ||||||||||||| | ||||||||| Sbjct 25209 GTCTCGCTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAAAGCGGCCATGC 25268 Query 219 ACCACCACCCATAG 232 ||||||||||| || Sbjct 25269 ACCACCACCCACAG 25282 >seq22 Length=5544135 Score = 100 bits (110), Expect = 5e-19 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||||||||||||| | |||||||||||||||||| |||||| |||||||||||||||| Sbjct 5520603 CTCCACCAACTAAGAGCAGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAAT 5520544 Query 254 CTGTC 258 ||||| Sbjct 5520543 CTGTC 5520539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796757144112