Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq13 84.2 1e-14 seq11 82.4 5e-14 seq22 73.4 2e-11 >seq13 Length=7545250 Score = 84.2 bits (92), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1904590 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1904647 Query 109 TAATACAACGCAAGC 123 |||| |||||| ||| Sbjct 1904648 TAAT-CAACGCGAGC 1904661 >seq11 Length=13962742 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 259033 CTCACTAAACCAT--CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 258977 Query 109 TAATACAACGCAAGCT 124 |||| |||| | |||| Sbjct 258976 TAAT-CAACACGAGCT 258962 >seq22 Length=5544135 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| |||| |||||| |||||||||||||| |||| Sbjct 5520878 CTCACTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTGTACAAAGGGCAAGGACT 5520821 Query 109 TAATACAACGCAAGCT 124 |||| ||||| |||| Sbjct 5520820 TAAT-CAACGTGAGCT 5520806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300784343360