Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq11 161 2e-37 seq22 136 7e-30 seq23 132 9e-29 seq34 122 2e-25 seq13 104 4e-20 >seq11 Length=13962742 Score = 161 bits (178), Expect = 2e-37 Identities = 193/258 (75%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||| | | ||| | |||| || | ||||| |||||||||||||||| Sbjct 258738 CTTCTTAGAGGGTCAAGTGGCGTTCAGCCACACGA-GCTTGAG-CAATAACAGGTCTGTG 258795 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||| || ||||||| | || | || | Sbjct 258796 ATGCCCTTAGATGTCCGGGGCTGCACGCGTGCCACACTGAGTGGATCAGCATGTGTCTAC 258855 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| ||| ||||||| | | || | | ||||| | ||||| | | |||| Sbjct 258856 CCTTCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGATTG 258915 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | |||||||||| || ||||||| || ||||| ||| || ||||||| Sbjct 258916 CAATTATTTCCAAAGAACGAGGAATTCCCAGTAAGCACGAGTCATAAGCTCGTGTTGATT 258975 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 258976 AAGTCCCTGCCCTTTGTA 258993 Score = 104 bits (114), Expect = 4e-20 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||| | Sbjct 95544 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGTG 95485 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 || || || | |||| |||| ||| ||||||| | | || | | ||||| Sbjct 95484 GATCAGCGTGTGTCTACCCTTCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTG 95425 Query 234 CTGGGGATAGAGCATTGCAATTATT 258 | ||||| | | |||||||||||| Sbjct 95424 ATAGGGATTGGGGATTGCAATTATT 95400 >seq22 Length=5544135 Score = 136 bits (150), Expect = 7e-30 Identities = 165/221 (75%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 || || ||| |||| ||||||||||||||||||||| | |||| ||||| || |||| Sbjct 5520619 TTCAGCCAA-AACATGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGAGCTTCGCACT 5520677 Query 169 GAC-AGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227 || ||| | | || || | |||| |||| ||| ||||||| | | || | | Sbjct 5520678 GAGTAGATC-AGCGTGTGTCTACCCTTCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCA 5520736 Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 ||||| ||||| | | |||||||||||| | | | |||||||||| || |||||| | Sbjct 5520737 CTCGTGAGTGGGATTGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGTG 5520796 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| | ||||||||| |||| ||||||||||| Sbjct 5520797 CGGGTCATAAGCTCACGTTGATTAAGTCCTTGCCCTTTGTA 5520837 >seq23 Length=5534081 Score = 132 bits (146), Expect = 9e-29 Identities = 164/223 (74%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| ||||||| ||||||||||||||||||||| | |||| ||| ||| || Sbjct 25173 AGATTGAGA-AATAACATGTCTGTGATGCCCTTAGATGTCCGGGGCTGCATGCGTTTCAC 25115 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 ||||| | || || || | |||| ||| |||| ||||||| | | || | Sbjct 25114 ACTGAGTGTATCAGCGTGTGTCTACCCTTCACCGAGAGGTGTGGGTAACCCGCTGAACCC 25055 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | ||||| | | ||| | | |||||||||||| | | | ||||| |||| | |||||| Sbjct 25054 CATTCGTGATAGAGATTGGGGATTGCAATTATTTCCCATGAACGAAGAATTGCCAGTAAG 24995 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || ||||| ||| | | ||||||| |||||||||||||||| Sbjct 24994 CACGGGTCATAAGCTCACTTTGATTAAGTCCCTGCCCTTTGTA 24952 >seq34 Length=14110343 Score = 122 bits (134), Expect = 2e-25 Identities = 160/221 (72%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| |||||||||||||||||||| ||||||||| | |||| |||| ||||| ||||| Sbjct 1298433 TTGAG-CAATAACAGGTCTGTGATGCGCTTAGATGTCCGGGGCTGCACTCGCGCCACACT 1298375 Query 169 GACAGAGC-CAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227 || | | || || || | |||| |||| ||| | | || | | Sbjct 1298374 GAGTGGACACAGCGTGTGTTTACCCTTCGCCGA----------TAACCCGCTGAACCCCA 1298325 Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 ||||| ||||| | | |||||||||||| | | |||||||||| || |||||||| Sbjct 1298324 CTCGTGACGGGGACTGGGGATTGCAATTATTCCCCACGAACGAGGAATTCCCAGTAAGCG 1298265 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| || | ||||||||| |||||||||||| ||| Sbjct 1298264 TGGGTCATAAGTTCACGTTGATTATGTCCCTGCCCTTCGTA 1298224 >seq13 Length=7545250 Score = 104 bits (114), Expect = 4e-20 Identities = 107/139 (77%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATA-GAGCATT 249 |||| |||| ||| ||||||| | | || | | ||||| | ||||| | | ||| Sbjct 1904769 CCTTCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTTGGGGATT 1904710 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||| | | |||||||||| || |||||||||| ||||| || ||||||||| Sbjct 1904709 GCAATTATTTACCATGAACGAGGAATTCCCAGTAAGCGCGGGTCATATGCTCGCGTTGAT 1904650 Query 310 TACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 1904649 TAAGTCCCTGCCCTTTGTA 1904631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947147411456