Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq10 526 7e-147 seq55 480 3e-133 seq25 291 3e-76 seq86 116 1e-23 seq9 116 1e-23 seq27 107 6e-21 seq17 98.7 3e-18 seq3 77.0 1e-11 >seq10 Length=24626513 Score = 526 bits (582), Expect = 7e-147 Identities = 449/549 (82%), Gaps = 24/549 (4%) Strand=Plus/Plus Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||| |||| || |||| ||||||| |||| |||| | |||||||||||||||||| Sbjct 3192339 TCTTCCGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGTCTTAGGACACCTGCGTTAC 3192398 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 ||| |||| ||| ||||||||| ||||||||||||||| || |||| | | ||| | Sbjct 3192399 CGTTAGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGCGCGGGT 3192458 Query 126 CGG---CCCGCGAAGGACCTTA-ACGCCAGAAA--ATGG------TCGGTGAAGACCAGT 173 || || | ||| ||| |||||| || | || ||| || | | Sbjct 3192459 CGCGCTCCAGGCCAGGCGCTTCGACGCCACAAGTGACGGCCCCGCTCGATGGGGCTCGCC 3192518 Query 174 TCC--GCTTCATTGATTAAGTaaaaa--aaCGATAAGGGTAGTGGTATTTCACTTGCG-- 227 ||| || ||| | | || |||| || ||||| |||||||||||||| ||| Sbjct 3192519 TCCCCGCCTCACCGGGTGGGTGAAAAGAAATCATAAGAGTAGTGGTATTTCAAGGGCGGC 3192578 Query 228 ---CCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAG 284 |||| | ||||||||||||||||||||| || ||| |||||| | | | |||| Sbjct 3192579 TCTCCGA---GCCTCCCACTTATTCTACACCTCGCATGTCTCTTCACAGTGCCAGCCTAG 3192635 Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3192636 AGTCAAGCTCAACAGGGTCTTCTTTCCCTGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 3192695 Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| Sbjct 3192696 TGGTTTCGCTAGATAGTAGGTGGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTC 3192755 Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3192756 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 3192815 Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3192816 ACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATC 3192875 Query 525 GCGTCAACA 533 ||||||||| Sbjct 3192876 GCGTCAACA 3192884 Score = 140 bits (154), Expect = 1e-30 Identities = 299/443 (67%), Gaps = 64/443 (14%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | |||||||| ||| |||||| Sbjct 15384793 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGAAACCAGCGTTACC 15384852 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||| ||| ||| |||| ||||||||||| ||| || |||| ||| || Sbjct 15384853 TTTTGACAGGTGT--CGCTCCAGTCAAACTCCCCAGCTGCCACTGTCCCTGGGGCGGGTC 15384910 Query 127 ------GGCCCGCGAAGGACCTTAACGCCAGAAA--ATGGTCGG-TGAAGAC-CAGTTCC 176 |||| | || ||| ||||||||| | | | | | | | | || || | Sbjct 15384911 ACGCCTGGCCAGGCTGGGCGCTTGACGCCAGAACCGAGAGCCTGCTCAGGGCTCACTTAC 15384970 Query 177 ---GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAA 232 || ||| ||||| ||||| ||||||||||||||||||||| | | || ||| Sbjct 15384971 CTGGCCTCAGCAGGTAAGTGAAAAAT-GATAAGGGTAGTGGTATTTCAATGGTAGCTGAA 15385029 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | || ||||||||||||||| ||||| ||| | Sbjct 15385030 GCCGC--CCACTTATTCTACAC--------TCATT-------------CTATA------- 15385059 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA-GCCCGTTCCCTTGGCTGTGGTTTC 351 ||| |||||||||||||| || ||||||||||| |||||||||||| Sbjct 15385060 --------------TTTACCCGCTGATTCCGCTAAAGCCCGTTCCCTGGGCTGTGGTTTC 15385105 Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATC-TCGTTAATCCATTCATGCGCGTCACTAAT 410 |||| |||| | || ||| ||| || || || ||||||||||||| |||||| || Sbjct 15385106 GCTACATAGCATGTACCTACA-TGGTAAGAATCATTCATCCATTCATGCGTGTCACTCAT 15385164 Query 411 TAGATGACGAGGCATTTGGCTAC 433 |||||||| |||||||||||||| Sbjct 15385165 TAGATGACAAGGCATTTGGCTAC 15385187 >seq55 Length=4898074 Score = 480 bits (532), Expect = 3e-133 Identities = 303/325 (93%), Gaps = 3/325 (1%) Strand=Plus/Plus Query 209 TAGTGGTATTTCACTTGCG-CCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATT 267 |||||||||||||| ||| ||||| | |||||||||||||||||||||||| ||| | Sbjct 4897656 TAGTGGTATTTCACCGGCGGCCGAAGC--CTCCCACTTATTCTACACCTCTCATGTCTCT 4897713 Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327 ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4897714 TCACAGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 4897773 Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 4897774 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGTTC 4897833 Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 4897834 ATCCATTCATGCCCGTCACTAATTAGATGACGAGGCATTGGGCTACCTTAAGAGAGTCAT 4897893 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 4897894 AGTTACCCCCGCCGTTTACCCGCGCTTCCTTGAATTTCTTCACTTTGACATTCAGAGCAC 4897953 Query 508 TGGGCAGAAATCACATTGCGTCAAC 532 ||||||||||||||| |||||||| Sbjct 4897954 GGGGCAGAAATCACATCGCGTCAAC 4897978 >seq25 Length=12193906 Score = 291 bits (322), Expect = 3e-76 Identities = 187/203 (92%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 332 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 391 ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||| Sbjct 10899919 GTTCCCTTGGCTGTGCTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCC 10899860 Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct 10899859 ATTCATGCGTGTCACTGATTACATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 10899800 Query 452 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTG-G 510 | ||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||| Sbjct 10899799 AGTCCAGCCGTTTACCCGCGCTTCATTGAATGTCTTCACTTTGACATTCAGAGCCCTGCA 10899740 Query 511 GCAGAAATCACATTGCGTCAACA 533 |||||||||||| ||||||||| Sbjct 10899739 GCAGAAATCACACCGCGTCAACA 10899717 >seq86 Length=1248282 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 1031951 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 1032010 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 1032011 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTC 1032057 >seq9 Length=8479312 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 3611173 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCACCTTAGGACACCTGCGTTACG 3611232 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 3611233 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTC 3611279 >seq27 Length=10553142 Score = 107 bits (118), Expect = 6e-21 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | | ||||||||||||||||| Sbjct 3858162 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCACTTTAGGACACCTGCGTTACC 3858103 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108 |||| |||| ||| ||||||||| ||||||||||||||| || Sbjct 3858102 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCA 3858061 >seq17 Length=7685682 Score = 98.7 bits (108), Expect = 3e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| || | ||| | ||||||||| ||||||||| Sbjct 3980158 CTTCTGCTCCACGGGAGGTTTCTGTCCTTCCCGAGCTCGCCTTAGGACGCCTGCGTTACC 3980099 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| ||| ||||||||||| || |||| Sbjct 3980098 GTTTGACAGGTGTACCGCCCCAGTCAAGCTCCCCACCTGCCACTGTC 3980052 >seq3 Length=24902066 Score = 77.0 bits (84), Expect = 1e-11 Identities = 75/97 (77%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| || |||| |||| |||| ||||||||||||||||||| Sbjct 11849870 CTTCTGCTCCAGGGGAGGTTCCTGTCCTCCCTGAGCTTGCCTTAGGACACCTGCGTTACA 11849811 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACC 103 ||| |||| ||| ||| ||||| || ||||||||| Sbjct 11849810 CTTTGACAGGTGTACCGTCCCAGTAAACCTCCCCACC 11849774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635109213696