Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq34 367 4e-99 seq23 365 1e-98 seq55 324 4e-86 seq22 288 3e-75 seq1 176 1e-41 seq104 165 2e-38 seq67 122 3e-25 seq11 82.4 2e-13 >seq34 Length=14110343 Score = 367 bits (406), Expect = 4e-99 Identities = 411/544 (76%), Gaps = 43/544 (8%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||| |||||||| || | | |||||| ||||||| ||||| | ||||||||| Sbjct 1299331 GTACTCATTTCAATTACAGAGTCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 1299390 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| || Sbjct 1299391 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTTGATGTGGTAGCTGT 1299450 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||| Sbjct 1299451 TTCTCAGGCTCCCTCTCCGGAATCGTACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 1299510 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | | |||||||||||||||| |||||| ||| |||||| | | || | | Sbjct 1299511 AGGCGCCGAAAGTGCCATCGAAAGTTGATAAGGCAGACATTCGAATGAGACGTTGCTGCC 1299570 Query 240 TCAA---GGCCATGCGATTCGTT--AAGTTATTATGAATCACC-AAGGAG---------- 283 | | ||||| ||||| | | | ||||| || ||||| ||| || Sbjct 1299571 ACGAGGGGGCCA-GCGATCGGCTCAAGGTTATCTAGAGTCACCAAAGCAGCCGGGGCGCT 1299629 Query 284 CCCCGAAG------------------GGCGTTGGTTTTTTATCTAATAAATACACCCCTT 325 |||||| | |||| |||||| ||| |||||| ||| | | Sbjct 1299630 CCCCGAGGTGGGGGGGTGGGCGACCTCGCGTGGGTTTTGGGTCTCATAAATGCACGCATC 1299689 Query 326 CC--GAAGTC-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA 382 || | ||| | | || || |||||||||||||||| |||| || | |||||||| | | Sbjct 1299690 CCCGGTGGTCAGTGCTTGTTGGCATGTATTAGCTCTAAAATTGCCGCAGTTATCCAAGCA 1299749 Query 383 --GTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT 440 || || | |||||| ||| |||||||||||||||| ||||||||||||||||||| Sbjct 1299750 ATGTCAGAGA-GATCAAAGGAACCATAACTGATTTAATGAACCATTCGCAGTTTCACTGT 1299808 Query 441 ATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 500 | | | | ||||||||| |||||||| |||||||| || ||||||||| |||||| Sbjct 1299809 ACCGTCCGTGTGTACTTAGACTCGCATGGCTAAATCTTTGGGATAAGCATATG-CTACTG 1299867 Query 501 GCAG 504 |||| Sbjct 1299868 GCAG 1299871 >seq23 Length=5534081 Score = 365 bits (404), Expect = 1e-98 Identities = 390/511 (76%), Gaps = 32/511 (6%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| || | |||||||| ||||||| ||||| ||||||||||| Sbjct 25800 GTACTCATTCCAATTACAGAGCCTCAAAAGAGTCCTGTATTGTTATTTTTTGTCACTACC 25859 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||| || || ||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 25860 TCCGCGAGTTCGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 25919 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||| ||||||| ||| |||||||||| | | |||||||| Sbjct 25920 TTCTCAGGCTCCCTCTCCGGAATTGAACCCTGATTGCCCGTTACCCCTGGTCACCATGGT 25979 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||| |||||| ||| || ||| ||||||| | Sbjct 25980 AGGCACAGAAAGTACCATCGAAAGTTGATTAGGCAGACATTCGAGTGAGAAATCGCCGCC 26039 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA--------GGAGCCCC-- 287 | ||| | ||||| | | | ||||| || ||||||| || || || Sbjct 26040 ACGAGGGCTAGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGTGGCGGGGCGCTCCCT 26099 Query 288 ---GAAGGG----------CGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGT 332 | |||| | | |||||| ||| |||||| || | | || ||||| Sbjct 26100 GAGGTAGGGGGCGACACCACATGGGTTTTGGGTCTGATAAATGCATGCATCCCTGGAAGT 26159 Query 333 C-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGT 389 | | | | || ||||||||||||||| ||||| |||| ||||||| ||| || | | Sbjct 26160 CAGCGCTCGTTGGCATGTATTAGCTCTGGAATTGCCACAATTATCCAAGTAACGTTA-GA 26218 Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 | |||||| ||| ||||||||||||||||||||||||||||||||||||| | | Sbjct 26219 GCGATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGTCCGT 26278 Query 450 TTATACTTAGACATGCATGGCTTAATCTTTG 480 | ||||||||| |||||||||||||||||| Sbjct 26279 GTGTACTTAGACTTGCATGGCTTAATCTTTG 26309 Score = 120 bits (132), Expect = 9e-25 Identities = 95/112 (85%), Gaps = 3/112 (3%) Strand=Plus/Plus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 |||||| ||| ||||||||||||||||||||||| ||||||||||| | | | Sbjct 26320 ATCAAAGGAACCATAACTGATTTAATGAGCCATTCT--GTTTCACTGTACCGTCCGTGTG 26377 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||| ||||||| ||||||||||||||||||||||| |||||||||| Sbjct 26378 TACTTAGACTTGCATGGTTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 26428 >seq55 Length=4898074 Score = 324 bits (358), Expect = 4e-86 Identities = 307/388 (79%), Gaps = 12/388 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| || | | |||||| ||||||| ||||| | ||||||||| Sbjct 4401006 GTACTCATTCCAATTACAGAGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 4401065 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4401066 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 4401125 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 4401126 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 4401185 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | |||||||||||||||||| |||||| ||| |||||| | ||||| | Sbjct 4401186 AGGCACAGAAAGTACCATCGAAAGTTGATAAGGCAGACATTCGAATGAGACGTCGCCACC 4401245 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTT 297 | ||||| |||||| | | | ||||| || || |||| | || | | Sbjct 4401246 ACGAGGCCCAGCGATTGGCTCGAGGTTATCTGGAGTCGCCAAAATGGCC------ACATG 4401299 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATTAG 354 |||||| || |||||| ||| | | || || ||| | | | || ||||||||||| Sbjct 4401300 GGTTTTGCGGCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTTGGCATGTATTAG 4401359 Query 355 CTCTAGAATTACCACGGTTATCCATGTA 382 ||| ||||| |||| |||||||| ||| Sbjct 4401360 CTCAGGAATTGCCACAGTTATCCAAGTA 4401387 >seq22 Length=5544135 Score = 288 bits (318), Expect = 3e-75 Identities = 314/413 (76%), Gaps = 32/413 (8%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| || | | |||||| ||||||| ||||| ||||||||||| Sbjct 5519842 GTACTCATTCCAATTACAGAGCCTCGAAAGAGTCCTGTATTGTTATTTTTTGTCACTACC 5519783 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 5519782 TCCCCGAGTCGGGAGTGGGTAATTTGCGTGCCTGCTACCTTCCTTGGATGTGGTAGCCGT 5519723 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| |||||||||||||||||||||||||| ||| |||||||||| | | |||||||| Sbjct 5519722 TTCTTAGGCTCCCTCTCCGGAATCGAACCCTGATTGCCCGTTACCCTTGGTCACCATGGT 5519663 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||| |||||||| |||||||| ||| |||||| | |||||| | Sbjct 5519662 AGGCACAGAAAGTACCATCAAAAGTTGAGAGGGCAGATATTCGAATGAGACGTCGCCGCC 5519603 Query 240 -TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAG-----------CC 285 | | ||||| ||||| | | | ||||| || ||||||| | | || Sbjct 5519602 ATGAGGGCCA-GCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGTGGCCGGGGCGCTCC 5519544 Query 286 CCGA-----AGGGCG--------TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAA 330 |||| ||||| | |||||| ||| |||||| ||| | | || || Sbjct 5519543 CCGAGGTGGGGGGCGACACCGCATGGGTTTTGGGTCTGATAAATGCACGCATCCCCGGAG 5519484 Query 331 GTC-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA 382 ||| | | | || ||||||||||||||| ||||| |||| ||||||| ||| Sbjct 5519483 GTCAGCGCTCGTTGGCATGTATTAGCTCTGGAATTGCCACAATTATCCAAGTA 5519431 Score = 129 bits (142), Expect = 2e-27 Identities = 90/101 (89%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 || ||||||||||||||||||||||||||||||||||| | | | ||||||||| | Sbjct 5518939 GACAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACTGTCCGTGTGTACTTAGACTT 5518880 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| |||||||||| Sbjct 5518879 GCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 5518840 >seq1 Length=20795362 Score = 176 bits (194), Expect = 1e-41 Identities = 103/107 (96%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 2313068 TATTTTTCGTCACTACCTCCCCGTGTCGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCC 2313009 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC 149 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2313008 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC 2312962 >seq104 Length=603824 Score = 165 bits (182), Expect = 2e-38 Identities = 139/166 (84%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAA 398 || ||||||||||||||||||||| |||| |||||||| ||| || || | |||||| Sbjct 225745 TTGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTAGAG-CGATCAAA 225803 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||| |||||||||||||||||||||||||||| ||||||| | | |||||| Sbjct 225804 GGAACCATAACTGATTTAATGAGCCATTCGCAGT--CACTGTACCGTCCATGTGTACTTA 225861 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 225862 GACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 225906 >seq67 Length=3587311 Score = 122 bits (134), Expect = 3e-25 Identities = 157/212 (74%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTC-CGAAGTCGGGGTTTTTAGCATGTATTAG 354 ||||||||| |||| ||||| || | | | || || || || || |||||||| Sbjct 945318 TTGGTTTTTGATCTCCTAAATGAACGCATCCACGGAGGTCATTTTGTTGGCTTGTATTAG 945259 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAAATAAACGATAACTGAT 413 |||||||||| | || |||| || ||| | | | || |||||| ||| ||| ||| | Sbjct 945258 CTCTAGAATTGCTACAGTTAAACAAGTAATGGAAGCACAATCAAAGGAACCATACCTGGT 945199 Query 414 TTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTAT--ACTTAGACATGCATGGCT 471 ||||| ||||||| ||| |||||||||| | || | | |||| ||| || |||||| Sbjct 945198 TTAATAAGCCATTTGCAATTTCACTGTACTGTCTGTGTGTGTACTTGGACTTGTATGGCT 945139 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||||| |||||||||||||||| |||| ||| Sbjct 945138 TAATCCTTGAGACAAGCATATG-TTACTTGCA 945108 >seq11 Length=13962742 Score = 82.4 bits (90), Expect = 2e-13 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||| | ||| || | | |||||| |||| || ||||| | ||||||||| Sbjct 4301534 GTACTCATTCCAGTGACAGAGCCTCGAAAGAGTCCTGCATTGTTATTTTTCGTCACTACC 4301593 Query 60 TCCCCGTGTCGGGATTGGGTAA 81 |||||||||||||| ||||||| Sbjct 4301594 TCCCCGTGTCGGGAGTGGGTAA 4301615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510316142592